Gene Information

Name : RTCIAT899_CH04665 (RTCIAT899_CH04665)
Accession : YP_007332891.1
Strain : Rhizobium tropici CIAT 899
Genome accession: NC_020059
Putative virulence/resistance : Unknown
Product : putative IS3 family transposase, IS150 group, OrfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 958766 - 959374 bp
Length : 609 bp
Strand : +
Note : -

DNA sequence : 
ATGATCGAGATGGGATTGAAGTCCCTGGTCCGGCCGAAGAAGTATCGCTCCTACAAGGGGCAGACGGGACGCGTGGCCCC
GGACCTCCTTCAGCGGCAGTTCACCGCCGAGCGTATGCATCAGAAATGGGTGACGGACGTCACCGAGTTCAACATCGCCG
GCCAAAAACTCTTCCTCTCGCCGGTCATGGACCTCCACAACGGCGAGATCGTTGCCTTCGAGACGGCTAGGCGGCCTGTC
TTCTCGTTGGTCAAGAACATGCTGGACAAGGCCCTGGACCAACTCTGCAATGCCGAGAGGCCGATCCTGCATTCCGATCA
GGGATGGCAATATCAGATGCCGGCCTGGGGCCAAATGCTTGAAAGCCGCAACATTGCCCAAAGCATGTCACGCAAAGGCA
ACTGCCTCGACAATGCCGCCATGGAGAGCTTCTTCGCCACCCTCAAATCCGAGTTCTTTTATCCCAACCACTTCGACAGC
ATCGAAAGCCTGCGTGATGGTGTCGAGGACTATATCCGATATTACAACAACGATCGCATCAGGCTAAAGCTTAAAGGGCT
GAGCCCTGTTCAATACAGGACCCAGCCCTTAAATCAGCCAAGCCAATAA

Protein sequence : 
MIEMGLKSLVRPKKYRSYKGQTGRVAPDLLQRQFTAERMHQKWVTDVTEFNIAGQKLFLSPVMDLHNGEIVAFETARRPV
FSLVKNMLDKALDQLCNAERPILHSDQGWQYQMPAWGQMLESRNIAQSMSRKGNCLDNAAMESFFATLKSEFFYPNHFDS
IESLRDGVEDYIRYYNNDRIRLKLKGLSPVQYRTQPLNQPSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 1e-54 53
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 6e-43 51
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 7e-43 50
SE0101 NP_763656.1 transposase Not tested SCCpbp4 Protein 4e-22 44
CDC7B_2064 YP_005163505.1 transposase-like protein Not tested Not named Protein 2e-28 44
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 2e-39 44
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 2e-39 44
tnp BAG06206.2 transposase for ISSau4-like Not tested Type-VII SCCmec Protein 3e-22 44