Gene Information

Name : phoB (RTCIAT899_CH02870)
Accession : YP_007332535.1
Strain : Rhizobium tropici CIAT 899
Genome accession: NC_020059
Putative virulence/resistance : Virulence
Product : phosphate regulon transcriptional regulatory protein PhoB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 582331 - 583014 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGGTTCCGAGAGTTGCTGTTGTAGAAGACGAGGAAGCGCTTAGCGTTCTGCTGCGCTACAATCTTGAGGCCGAAGGCTT
CGAGGTGGACACGATCCTCAGAGGCGATGAGGCCGAGCTGCGTCTCCAGGAGCGCATCCCCGATCTCCTGATCCTCGACT
GGATGCTCCCCGGCGTATCGGGCATCGAGCTCTGCCGCCGGCTGCGTATGCGGCCGGAGACGGAGCGCCTGCCGATCATC
ATGCTGACGGCCCGCGGCGAGGAAAGCGAGCGCGTGCGCGGGCTTTCGACCGGCGCGGACGATTATGTCGTCAAGCCGTT
CTCGACGCCGGAGCTGATGGCTCGCGTCAAGGCGATGCTGCGGCGCGCCCGCCCGGAGGTTCTCTCCACGGTGCTGCGCT
GCGGCGATATCGAGCTGGACCGCGAAACTCATCGCGTCCACCGCAAGAGCCGCGAAGTGCGGCTGGGGCCGACGGAATTC
CGCCTGCTTGAGTTCCTGATGTCCTCGCCGGGCCGCGTCTTCTCGCGTTCGCAGCTGCTCGACGGCGTATGGGGTCACGA
TATCTACGTCGACGAACGCACGGTCGACGTCCATGTCGGCCGCCTGCGCAAGGCGCTCAATTTCTCCAATATGCAGGATG
TCATCCGCACCGTTCGCGGCGCGGGCTACTCCATGGAAGCCTGA

Protein sequence : 
MVPRVAVVEDEEALSVLLRYNLEAEGFEVDTILRGDEAELRLQERIPDLLILDWMLPGVSGIELCRRLRMRPETERLPII
MLTARGEESERVRGLSTGADDYVVKPFSTPELMARVKAMLRRARPEVLSTVLRCGDIELDRETHRVHRKSREVRLGPTEF
RLLEFLMSSPGRVFSRSQLLDGVWGHDIYVDERTVDVHVGRLRKALNFSNMQDVIRTVRGAGYSMEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 9e-34 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-33 42
mprA YP_005680459.1 response regulator mprA Not tested PiCp 3 Protein 6e-27 41
mprA YP_005682550.1 response regulator mprA Not tested PiCp 3 Protein 6e-27 41
tcsR1 YP_003782583.1 two-component system transcriptional regulatory protein Not tested PiCp 3 Protein 6e-27 41
mprA YP_005684640.1 response regulator mprA Not tested PiCp 3 Protein 6e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB AE000516.2.gene3505. Protein 6e-33 44
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB HE999704.1.gene2815. Protein 2e-39 43
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB NC_011595.7057856.p0 Protein 6e-35 42
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB NC_010410.6002989.p0 Protein 6e-35 42
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB NC_002952.2859905.p0 Protein 6e-41 42
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB NC_002951.3237708.p0 Protein 9e-41 42
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB NC_002758.1121668.p0 Protein 9e-41 42
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB NC_009641.5332272.p0 Protein 9e-41 42
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB NC_013450.8614421.p0 Protein 9e-41 42
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB NC_007793.3914279.p0 Protein 9e-41 42
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB NC_003923.1003749.p0 Protein 1e-40 42
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB NC_007622.3794472.p0 Protein 6e-41 42
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB NC_002745.1124361.p0 Protein 9e-41 42
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB NC_009782.5559369.p0 Protein 9e-41 42
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB NC_010400.5986590.p0 Protein 5e-34 41
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB CP001918.1.gene3444. Protein 1e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB VFG1390 Protein 8e-36 43
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB VFG1563 Protein 5e-34 42
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB VFG1702 Protein 5e-34 42
phoB YP_007332535.1 phosphate regulon transcriptional regulatory protein PhoB VFG1386 Protein 1e-30 41