Gene Information

Name : RTCIAT899_CH18225 (RTCIAT899_CH18225)
Accession : YP_007335553.1
Strain : Rhizobium tropici CIAT 899
Genome accession: NC_020059
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3718282 - 3718857 bp
Length : 576 bp
Strand : +
Note : -

DNA sequence : 
ATGCTTTATACGATCGCCAAGCGCCTTTTCGATTTTCTCGCCGCTCTCGCCGCGACCATCGTTTTTTTCATTCCGGTCCT
GATCGTCGCACTCGCGGTACGGCTGACCTCGCCAGGTCCGATCCTCTATTGGTCGGATCGGGTCGGCCGGAAAAACCGAA
TCTTCCGCATGCCGAAATTCCGTAGTATGCGCACCGACACGCCGGCGGTTGCGACCCATCTGCTGAAGGACCCCGACATT
TATCTGACGCCGATCGGCTCCTTCCTGCGCAAGTCGAGCCTCGACGAGCTGCCGCAGCTCTGGTGCATCCTGAAAGGCGA
GATGAGCATCGTCGGCCCGCGCCCGGCGCTCTTCAACCAGCACGATCTCGTCGCCCTGCGCACGCAACGCGGTGTCGACG
CGCTGCTGCCAGGCTTGACCGGCTGGGCGCAGGTCAATGGCCGCGACGAATTGCCGATCCCCGAGAAGGTGGCACTGGAC
GAAGATTATCTGCGCCGGCGCTCCTTTCTTTTCGATCTCAAGATCATTTTCCTGACGGTCTTGAAAGTGGTTCGACGCGA
CGGAGTTGCCCATTAA

Protein sequence : 
MLYTIAKRLFDFLAALAATIVFFIPVLIVALAVRLTSPGPILYWSDRVGRKNRIFRMPKFRSMRTDTPAVATHLLKDPDI
YLTPIGSFLRKSSLDELPQLWCILKGEMSIVGPRPALFNQHDLVALRTQRGVDALLPGLTGWAQVNGRDELPIPEKVALD
EDYLRRRSFLFDLKIIFLTVLKVVRRDGVAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 2e-39 50
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 1e-37 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RTCIAT899_CH18225 YP_007335553.1 sugar transferase VFG1309 Protein 4e-37 48
RTCIAT899_CH18225 YP_007335553.1 sugar transferase VFG1369 Protein 2e-30 46