Gene Information

Name : RTCIAT899_CH17060 (RTCIAT899_CH17060)
Accession : YP_007335321.1
Strain : Rhizobium tropici CIAT 899
Genome accession: NC_020059
Putative virulence/resistance : Resistance
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3452122 - 3452832 bp
Length : 711 bp
Strand : +
Note : -

DNA sequence : 
TTGGCAAAAACCATCATCGAGCTGAAGAAGGCGGATTTGACGCTCGGCAATGCCGCCGCATCAGTCCATGTGCTGAAGGG
CATTGACCTCACCATCATGGAGGGTGAATCGGTGGGCATCGTCGGCCCCTCCGGTTCCGGCAAGTCCACTCTGCTGATGG
TGCTGGCCGGCCTCGAAAAGCTCGACAGCGGCGAACTTCTGATCCGCGACACGCCGCTGCATAGCCTGAGTGAAGATCGC
ATCGCCGATTTCCGCGGCCGCAACATCGGCATCGTTTTCCAATCCTTCCACCTGATCGCCAACATGACGGCGCTCGAAAA
TGTCGCAGTGCCGCTGGAACTTGCGAACGTCCGCGATGCCTTCGATATCGCCAGGCGGGAGCTGGAAGCAGTGGGGCTGG
GCGAGAGGCTCACGCACTATCCCGGCCAGCTCTCCGGCGGCGAGCAACAGCGCGTCGCCATCGCCCGCGCGCTGGCGCCT
TCGCCCGCCGTCCTGATTGCCGACGAACCGACGGGCAATCTCGATACCGATACCGGCCGGCAGATCGCCGATCTGCTCTT
CGCCCAGCAGGCCGAGCGCGGCACGACCATGCTGCTCGTCACCCACGATCCCGCTCTTGCCGCCCGTTGCTCTCGGCAGA
TCCGCGTCCGTTCCGGCGAAATCGAGAGCGACAGCATGCGCACGCGCACCAACCAGGCAGCCATTGCATGA

Protein sequence : 
MAKTIIELKKADLTLGNAAASVHVLKGIDLTIMEGESVGIVGPSGSGKSTLLMVLAGLEKLDSGELLIRDTPLHSLSEDR
IADFRGRNIGIVFQSFHLIANMTALENVAVPLELANVRDAFDIARRELEAVGLGERLTHYPGQLSGGEQQRVAIARALAP
SPAVLIADEPTGNLDTDTGRQIADLLFAQQAERGTTMLLVTHDPALAARCSRQIRVRSGEIESDSMRTRTNQAAIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-28 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RTCIAT899_CH17060 YP_007335321.1 ABC transporter, ATP-binding protein NC_008702.1.4606598. Protein 4e-32 47
RTCIAT899_CH17060 YP_007335321.1 ABC transporter, ATP-binding protein NC_012469.1.7686878. Protein 9e-39 46