Gene Information

Name : hemC (RTCIAT899_CH16915)
Accession : YP_007335292.1
Strain : Rhizobium tropici CIAT 899
Genome accession: NC_020059
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3426634 - 3427563 bp
Length : 930 bp
Strand : +
Note : -

DNA sequence :
ATGCAAACAAAACCTTTCCGGATCGGCACGCGCGGCAGCCCGCTGGCGCTCGCCCAGGCGCGAGAAGCGCGCGACCGCCT
GATGGCGGCCCATGGCCTTCCGGAGGAGATGTTCGAAATCGTCGTTCTCACCACCAAGGGCGACCGCATCACCGACCGCT
CGCTCGCGGCAATCGGCGGCAAGGGTCTGTTCACGGAAGAGCTGGAAGAGAAGCTGACCTCAGGCGAACTCGACTTCGCC
GTGCATTCGGCCAAGGATATGGCAACGAAGCTGCCCCAGGGCCTGGCGCTCACAGCTTATCTGCCGCGCGAGGACATTCG
CGATTCCGTCATCGGCCGCACCGCGCCGAAACTGATCGAGCTGCCGCATGGCGCTACCGTCGGATCGGCGTCGCTGCGCC
GCCAGGCGCTGATCCGTCGCCTGCGCCCTGATATCAACGTCATTACCTTCCGCGGTTCGGTTCAGACCCGCCTGCGCAAG
CTGGAAGAGGGGCAGGCCGACGCCACCTTGCTGGCGCTTGCAGGCCTGAAGCGGCTTGGCATGGTCGAGGTCATCACCGA
TATTCTCGACCCGGATGAATTTCCGCCCGCGCCCGCACAAGGCGCAATCGCCATCGAAAGCCGGATCGACGATCAGCAGA
TGAACGAGCTGCTCGCCGCCGTCAATGATGCGCCGACTTTCGACGCGGTATCCTGCGAACGCGCTTTCCTGGCGGCACTC
GACGGGTCCTGTCGCACGCCGATAGCCGGCTACGCAATTTGCGAAGGCGATCATCTGCGTTTCTTCGGCATGATCCTCAC
TCCGGATGGCCGCCAAGTGCACACGACCACCATCGAGGGCCACCGGCGCGATGCCGAGGCGCTGGGGATCAATGCCGGTC
AGGCGATCCGCGCCGAGGCCGGCAGCACCTTCTTCGAAGACTGGACCTGA

Protein sequence :
MQTKPFRIGTRGSPLALAQAREARDRLMAAHGLPEEMFEIVVLTTKGDRITDRSLAAIGGKGLFTEELEEKLTSGELDFA
VHSAKDMATKLPQGLALTAYLPREDIRDSVIGRTAPKLIELPHGATVGSASLRRQALIRRLRPDINVITFRGSVQTRLRK
LEEGQADATLLALAGLKRLGMVEVITDILDPDEFPPAPAQGAIAIESRIDDQQMNELLAAVNDAPTFDAVSCERAFLAAL
DGSCRTPIAGYAICEGDHLRFFGMILTPDGRQVHTTTIEGHRRDAEALGINAGQAIRAEAGSTFFEDWT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-46 43
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-46 43