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Name : clpB (RTCIAT899_CH16125) Accession : YP_007335136.1 Strain : Rhizobium tropici CIAT 899 Genome accession: NC_020059 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 3258714 - 3261314 bp Length : 2601 bp Strand : - Note : - DNA sequence : ATGAATATCGAAAAATACTCCGAACGGGTTCGCGGTTTCCTGCAATCCGCTCAAACCAATGCGCTTGCGCAAGGAAATCA GCAGTTCACCCCCGAGCATGTTCTCAAGGTGCTTCTGGACGACGACCAGGGGATGGCTGCCTCGTTGATCGAACGCGCCG GCGGTGATGCCAAGGCTGCGCGTCTTGCCAATGATGCCGCGCTTGCCAAGCTGCCGAAGGTTTCCGGCGGCGACGGCCAG GTCTATCTCTCGCAGCCGCTCGCCAAGGTCTTTGCCACTGCTGAAGATGCCGCGAAGAAGGCTGGCGACAGTTTCGTCAC TGCCGAGCGTCTCTTGCAGGCTCTGGCCATCGAACCCTCGGCTTCCACTTCGGCGAGCCTGAAGAAGGCCGGCGTTACAC CTGTTGCCCTCAATCAGGTCATCAACGATATCCGCAAGGGCCGCACGGCCGACTCGGCCAATGCGGAGCAGGGCTTCGAT TCCTTGAAGAAATATGCCCGCGACCTCACCGCCGAGGCCCGCGAAGGCAGGCTCGACCCTGTGATCGGCCGTGATGACGA AATCCGTCGCACGATCCAGGTCCTGTCGCGCCGCACGAAGAACAATCCTGTGCTGATCGGCGAGCCCGGCGTCGGCAAGA CGGCGATCGTCGAAGGCTTGGCGTTGCGCATCGTCAATGGCGACGTGCCGGAATCGCTGAAGGATAAGAAGCTGATGGCG CTCGACATGGGCGCGCTGATTGCCGGTGCAAAATTCCGCGGCGAGTTTGAAGAGCGGCTGAAAGCCGTGCTCAACGAGGT GCAGTCGGAAAACGGCGAGATCATCCTGTTCATCGATGAGATGCACACCCTCGTCGGAGCCGGCAAGGCTGACGGCGCCA TGGATGCGTCCAACCTTCTGAAGCCCGCCCTTGCACGTGGCGAGCTGCACTGCGTCGGTGCGACCACGCTCGATGAATAC CGCAAGCATGTCGAGAAGGATCCGGCACTTGCCCGCCGCTTCCAGCCCGTCATGGTCGAGGAGCCGACGGTCGAAGACAC GATCTCGATCCTGCGCGGCTTGAAGGAAAAGTATGAGCAGCACCACAAGGTGCGCATCGCCGATGCCGCGCTGGTGGCTG CCGCAACCCTGTCGAACCGCTACATCACCGACCGTTTCCTGCCGGATAAGGCCATCGACCTGATGGACGAAGCCGCGGCG CGTCTGCGCATGCAGGTGGATTCCAAGCCGGAAGAGCTCGACGAACTCGATCGCCGCATCATTCAGCTGAAGATCGAACG CGAGGCGTTGAAGAAGGAAACCGACCAGGCCTCGGCTGACCGGCTGAAGCGGCTGGAAACGGATCTTACGTCTCTGGAAG AGGAAGCCGATGCGCTGACCGCGCGCTGGCAGGCCGAAAAGCAGAAGCTTGGTCTTGCGGCCGATCTAAAGAAGCAGCTC GACGATGCACGCAACGAGCTCGCCATTGCCCAGCGCAAGGGTGAATTCCAGCGCGCCGGCGAGCTTGCCTATGGCGTGAT CCCCAATCTTGAGAAGGAACTTCACGCCGCGGAAGAGCAGGATAGTGCCCGCGATTCCATGGTGCAGGAGGTCGTCACCG CCGACAACATCGCCCAGGTGGTTTCCCGCTGGACCGGGATTCCCGTGGACAAGATGCTGGAAGGCGAGCGCGACAAGCTG CTCAGGATGGAAGACGAGCTCGCAAAATGGGTCGTCGGCCAGGGCGATGCCGTTCAGGCCGTCTCTCGCGCCGTTCGCCG CTCGCGCGCTGGCTTGCAGGATCCGAACCGGCCGATCGGCTCGTTCATCTTCCTCGGCCCGACCGGTGTCGGCAAGACGG AGCTGACCAAGGCGCTTGCCCGCTTCCTCTTCGACGACGACACCGCGATGGTGCGCATCGACATGTCCGAGTACATGGAG AAACACTCCGTGGCCCGGCTGATCGGTGCTCCTCCCGGCTATGTCGGCTATGAGGAAGGCGGCGCGCTGACCGAAGCCGT CCGCCGTCGGCCCTATCAGGTCGTGCTGTTCGACGAGATCGAAAAGGCGCATCCCGATGTCTTCAACATCCTGCTCCAGG TTCTGGATGACGGACGTTTGACGGACGGACAGGGCCGCACGGTCGATTTCCGCAACACGATGATCATCATGACTTCCAAT CTGGGCGCCGAATATCTGACCCAGCTGAAGGATGGCGATGACAGCGATCTGGTACGCGAGCAGGTGATGGAAGTCGTCCG GTCGCATTTCCGGCCGGAATTCCTGAACCGTATCGACGAAATCATCCTGTTCCATCGCTTGAAGCGCGATGAGATGGGCG CGATCGTCGATATCCAGCTCGAGCGGCTGCTGAAGCTGCTGTCGGAACGCAAGATCACGCTCGAACTCGATGACGATGCC CGCAACTGGCTCGCCAACAAGGGTTACGATCCGGTCTATGGGGCAAGGCCGCTGAAGCGGGTGATCCAGAAATACGTCCA GGATCCGCTCGCCGAACAGATCCTTTCGGGTCAAATTCCGGATGGTTCGCTCGTCAAGGTCACCAGCGGTTCGGACCGGC TGTTGTTTCGTCCGCGCCAGGCGGTAAACGAAGCGGCCTAA Protein sequence : MNIEKYSERVRGFLQSAQTNALAQGNQQFTPEHVLKVLLDDDQGMAASLIERAGGDAKAARLANDAALAKLPKVSGGDGQ VYLSQPLAKVFATAEDAAKKAGDSFVTAERLLQALAIEPSASTSASLKKAGVTPVALNQVINDIRKGRTADSANAEQGFD SLKKYARDLTAEAREGRLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDKKLMA LDMGALIAGAKFRGEFEERLKAVLNEVQSENGEIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEY RKHVEKDPALARRFQPVMVEEPTVEDTISILRGLKEKYEQHHKVRIADAALVAAATLSNRYITDRFLPDKAIDLMDEAAA RLRMQVDSKPEELDELDRRIIQLKIEREALKKETDQASADRLKRLETDLTSLEEEADALTARWQAEKQKLGLAADLKKQL DDARNELAIAQRKGEFQRAGELAYGVIPNLEKELHAAEEQDSARDSMVQEVVTADNIAQVVSRWTGIPVDKMLEGERDKL LRMEDELAKWVVGQGDAVQAVSRAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKALARFLFDDDTAMVRIDMSEYME KHSVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTMIIMTSN LGAEYLTQLKDGDDSDLVREQVMEVVRSHFRPEFLNRIDEIILFHRLKRDEMGAIVDIQLERLLKLLSERKITLELDDDA RNWLANKGYDPVYGARPLKRVIQKYVQDPLAEQILSGQIPDGSLVKVTSGSDRLLFRPRQAVNEAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-106 | 43 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-105 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 8e-106 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_007335136.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 2e-117 | 45 |
| clpB | YP_007335136.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 2e-108 | 43 |
