Gene Information

Name : RTCIAT899_CH14475 (RTCIAT899_CH14475)
Accession : YP_007334817.1
Strain : Rhizobium tropici CIAT 899
Genome accession: NC_020059
Putative virulence/resistance : Unknown
Product : putative IS3 family transposase, IS407 group, OrfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2912168 - 2912983 bp
Length : 816 bp
Strand : +
Note : -

DNA sequence :
GTGGTGAAGGGTATGTGCCGGGACTGGGCAATCTCGATCCGGCGCGCCTGCGGGGCGCTGAACTTCGATCGTTCGACCTA
CCACTACACCTCTCGCCGTGCCGATCAGGCCGGCTTGGAACGTCGTATTCGAGAGATCTGCGAGACCCGTGTCCGTTACG
GCTATCGTCGTGTGCATGTGCTGTTGGAACGCGAGGGTTGGGGCACAAGCATCAAGCGAACCTATCGCATTTACAAGGAC
TTGGGTCTTCAACTGCGCAACAAGACGCCGAAGCGCCGGGTCAAAGCCAAGCTGCGGGAGGATCGTCAAATGGCAGTCGG
TCCGAACGATGTTCGGGCCATGGACTTTGTTCACGACCAACTCGCGACTGGGAAGAAGCTGCGCGTCTTGACGGTGGTCG
ATACCTACTCGCGTTATGTACCGGTGCTTGATCCACGTCACAGCTATCGCGGTGAAGATGTCGTGCAAACCCTGGAACGA
GTATGCCGGAAAGTTGGCTATCCGAAGACGATCAGGGTGGATCAGGGCACTGAATTTGTGTCACGCGACCTCGACCTTTG
GGCCTATGCCAAAGGCGTGACGTTGGACTTCTCTCGCCCAGGCAAGCCCACGGACAACGCCTTTATTGAAGCTTTCAATG
GCCGCTTCCGGGCGGAGTGCCTGAACCAGCATTGGTTCCTGACCCTTGCGGATGCCCGCGAAAAGATGGAGGATTGGCGT
CGATACTATAATGAGGAACGGCCTCATGGTGCGATCGGCAACAAGGTCCCGATCTCGCTGATGAATTCGGGAGGCGCAAC
CAGCCCGCCTCCTTGA

Protein sequence :
MVKGMCRDWAISIRRACGALNFDRSTYHYTSRRADQAGLERRIREICETRVRYGYRRVHVLLEREGWGTSIKRTYRIYKD
LGLQLRNKTPKRRVKAKLREDRQMAVGPNDVRAMDFVHDQLATGKKLRVLTVVDTYSRYVPVLDPRHSYRGEDVVQTLER
VCRKVGYPKTIRVDQGTEFVSRDLDLWAYAKGVTLDFSRPGKPTDNAFIEAFNGRFRAECLNQHWFLTLADAREKMEDWR
RYYNEERPHGAIGNKVPISLMNSGGATSPPP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 4e-41 47
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 5e-49 47
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 5e-52 44