Gene Information

Name : RTCIAT899_CH14470 (RTCIAT899_CH14470)
Accession : YP_007334816.1
Strain : Rhizobium tropici CIAT 899
Genome accession: NC_020059
Putative virulence/resistance : Unknown
Product : putative IS3 family transposase, IS407 group, OrfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2911881 - 2912147 bp
Length : 267 bp
Strand : +
Note : -

DNA sequence :
ATGAAGGCATCGCAGTTTTCGGACGCGCAAAAGGCGTTCATTTTGAAGCAGGGTGATGAAGGTGTGCCGGTTGCGGAGAT
CTGTCGGAAGGCGGGAATTAGCCAGGCGACCTATTTCAACTGGAAGAAAAAGTACGCCGGCATGTTGCCGCCGGAGATGA
AGAAGCTGAAGCAACTCGAGGACGAGAATGCGCGACTGAAGAAGATCGTCGCGGATCTGACGCTGGACCGTGAGATGTTG
CAGGATGTTATTCGGCGAAAGCTCTAA

Protein sequence :
MKASQFSDAQKAFILKQGDEGVPVAEICRKAGISQATYFNWKKKYAGMLPPEMKKLKQLEDENARLKKIVADLTLDREML
QDVIRRKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 4e-22 53
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 5e-22 53
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 4e-18 48
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 3e-16 47
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 2e-15 46
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 9e-16 46
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 9e-16 46