Gene Information

Name : ureC (RTCIAT899_CH13815)
Accession : YP_007334687.1
Strain : Rhizobium tropici CIAT 899
Genome accession: NC_020059
Putative virulence/resistance : Virulence
Product : urease, alpha subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2776505 - 2778217 bp
Length : 1713 bp
Strand : -
Note : -

DNA sequence :
ATGCCCTACAAGATTTCTCGTGCCGCCTATGCCAACATGTTCGGACCGACTGTCGGCGACAAGGTTCGTCTGGCAGATAC
CGAATTGTTCATCGAAGTGGAGAAGGATTTCACCACCTATGGCGAGGAGGTGAAGTTCGGCGGCGGCAAGGTCATCCGTG
ACGGCATGGGACAGAGCCAGGTGACGCGCGCCGGCGGCGCCGTCGATACAGTCATTACGAATGCGCTCATCCTTGATCAT
TGGGGAATCGTCAAGGCGGATATCGGCCTGAGGGACGGCCGCATTGTCGCAATCGGCAAGGCCGGAAATCCGGATATGCA
GCCCAATGTCAATATCATCGTCGGACCCGGCACGGAGGCGATTGCGGGTGAGGGGAAGATCGTCACCGCCGGTGGCATGG
ACAGCCATATTCACTTCATCTGCCCGCAGCAGATCGAGGAAGCCCTGATGTCGGGCGTCACCACCATGCTTGGAGGCGGC
ACCGGGCCGGCGCATGGCACGCTGGCAACGACCTGCACGCCGGGACCGTGGCATCTGGCGCGGATGATCGAATCCTTCGA
CGCCTTTCCGATGAATATCGGCCTTTCCGCCAAGGGCAATGCCTCCGTGCCGGCCGCACTGGAGGAAATGGTGCTTGGCG
GCGCCTGCGCGCTCAAGCTGCATGAGGATTGGGGCACGACGCCGGCGGCGATCGATTGCTGCCTCAGCGTTGCGGACGAG
TATGATGTGCAGGTGATGATCCACACGGATACATTGAATGAAAGCGGCTTCGTGGAGGATACGATCGGTGCCATCAAGGG
TCGCACCATTCACGCCTTCCACACGGAAGGCGCGGGCGGCGGCCATGCGCCAGATATCATCAAGATCTGCGGCCAGTCGA
ACGTCATCCCGTCCTCGACTAACCCGACGCGGCCCTATACGGTTAATACGATCGCCGAGCATCTGGACATGCTGATGGTC
TGCCATCACCTGTCGCCGTCGATCCCGGAGGATATCGCCTTTGCCGAAAGCCGTATCCGCAAGGAAACGATCGCAGCCGA
AGATATTCTCCACGATATCGGCGCCTTTTCGATCATTTCCTCCGACAGCCAGGCGATGGGCCGTGTCGGCGAAGTGGCGA
TCCGTACCTGGCAGACTGCCGACAAGATGAAACGCCAGCGCGGCCGCCTGGCACAGGAGGTAGGCGACAACGATAATTTC
CGCGCGAAGCGCTACATCGCCAAATATACGATCAACCCGGCGATCGCGCATGGCGTCAGCCATGAGGTCGGTTCGATCGA
GGTCGGCAAGCGCGCCGATCTGGTGCTCTGGAACCCGGCTTTCTTCGGCGTGAAGCCGGAGATGGTGCTGATCGGCGGCT
CGATCGCCGCAGCACCGATGGGCGACCCGAATGCCTCTATTCCGACGCCGCAACCGATGCACTACCGGCCGATGTTCGGC
GCTTATGGCAAGAATCGCACGAATTCGTCGGTGACCTTCGTTTCTCAGGCTGCGTTCGATGCGGGACTTGCCGCCAAGCT
TGGTGTCGCCAAGACGCTGCTGCCCGTTCGGAACACGCGCGGCGGCATTTCCAAGGCATCGATGATCCATAACAGCCTGA
CGCCGCATATCGAGGTGGACCCGGAAACCTATGAAGTGCGTGCCGATGGCGAGCTTCTGACCTGCGAACCGGCAACCGTG
CTGCCGATGGCGCAGCGATATTTCCTTTTCTGA

Protein sequence :
MPYKISRAAYANMFGPTVGDKVRLADTELFIEVEKDFTTYGEEVKFGGGKVIRDGMGQSQVTRAGGAVDTVITNALILDH
WGIVKADIGLRDGRIVAIGKAGNPDMQPNVNIIVGPGTEAIAGEGKIVTAGGMDSHIHFICPQQIEEALMSGVTTMLGGG
TGPAHGTLATTCTPGPWHLARMIESFDAFPMNIGLSAKGNASVPAALEEMVLGGACALKLHEDWGTTPAAIDCCLSVADE
YDVQVMIHTDTLNESGFVEDTIGAIKGRTIHAFHTEGAGGGHAPDIIKICGQSNVIPSSTNPTRPYTVNTIAEHLDMLMV
CHHLSPSIPEDIAFAESRIRKETIAAEDILHDIGAFSIISSDSQAMGRVGEVAIRTWQTADKMKRQRGRLAQEVGDNDNF
RAKRYIAKYTINPAIAHGVSHEVGSIEVGKRADLVLWNPAFFGVKPEMVLIGGSIAAAPMGDPNASIPTPQPMHYRPMFG
AYGKNRTNSSVTFVSQAAFDAGLAAKLGVAKTLLPVRNTRGGISKASMIHNSLTPHIEVDPETYEVRADGELLTCEPATV
LPMAQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 0.0 71
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 0.0 71
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 1e-162 62
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 6e-164 62
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 6e-164 62
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 6e-164 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ureC YP_007334687.1 urease, alpha subunit VFG0270 Protein 1e-166 64