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Name : choV (RTCIAT899_CH13025) Accession : YP_007334530.1 Strain : Rhizobium tropici CIAT 899 Genome accession: NC_020059 Putative virulence/resistance : Unknown Product : choline ABC transporter, ATP-binding protein ChoV Function : - COG functional category : - COG ID : - EC number : - Position : 2617614 - 2618663 bp Length : 1050 bp Strand : + Note : - DNA sequence : ATGACTGTCGCCGTCGATTTCAAAAATGTCAGCATCATCTTCGGCGATCGTCCAGATGCCGCCCTGAAACTTGTCGACGC AGGCAAGTCGCGCGACGAGATCGGTAAATCCACCGGCATGGTGCTCGGTGTAGCCAATGCCTCCCTGCAAATCGAAGAGG GCGAAATTCTCGTGCTGATGGGCCTGTCCGGCTCCGGCAAATCGACCCTACTGCGCGCTGTCAACGGCCTTGCGCCCGTC GTGCGTGGCGATGTCGTCGTCAACACCAAGAATGGCCCGATCAATCCTTACACCTGCAGCCCAAAAGCCCTGCGCGACCT GCGCATGCACACCGTCTCCATGGTTTTCCAGCAGTTCGCGCTGCTGCCCTGGCGCACGGTCGCCGACAATGTCGGCTTCG GGCTAGAGCTTGCCGGCGTGCCGGATGCTGAGCGCAAGAAGCGCGTCGACGAGCAGCTACAGCTCGTCAACCTCACGCAA TGGGCCAATCGCAAGGTCAATGAACTTTCTGGTGGCATGCAGCAGCGCGTCGGTCTCGCCCGTGCCTTTGCGACCGGAGC GCCGATCCTGCTCATGGACGAGCCGTTCTCCGCGCTCGACCCACTGATCCGCACCCGCCTGCAGGACGAACTCCTGGAAT TCCAGCGCCGCCTGAAGCGCACGATCCTGTTCGTCAGCCACGATCTGGACGAGGCATTCCGCATCGGCAACCGCATCGCC ATTATGGAAAGCGGTCATATCATCCAGTGCGGAACGCCACAGGAGATCGTCAAGAACCCTGCCGACCAATATGTTGCCGA CTTCGTGCAGCACATGAACCCGATCAGCATGCTGACGGCGCGGGATGTCATGCAGCAGGGCGTCGGACATTCGGCCAATG CGGGTTCCGTCACCGCGACGGCAACCGCCGCGACACCGCTCATCGATATCCTTGACGCCTTGACGCGCCAGCCGGGCAAT ATCGGCGTTGTTGACAATGGCACGATTATTGGAACGATCTCCGCGCAAGACGTGGTGTCAGGCCTCACCAGCCACCGGCG AAAGGAGTAG Protein sequence : MTVAVDFKNVSIIFGDRPDAALKLVDAGKSRDEIGKSTGMVLGVANASLQIEEGEILVLMGLSGSGKSTLLRAVNGLAPV VRGDVVVNTKNGPINPYTCSPKALRDLRMHTVSMVFQQFALLPWRTVADNVGFGLELAGVPDAERKKRVDEQLQLVNLTQ WANRKVNELSGGMQQRVGLARAFATGAPILLMDEPFSALDPLIRTRLQDELLEFQRRLKRTILFVSHDLDEAFRIGNRIA IMESGHIIQCGTPQEIVKNPADQYVADFVQHMNPISMLTARDVMQQGVGHSANAGSVTATATAATPLIDILDALTRQPGN IGVVDNGTIIGTISAQDVVSGLTSHRRKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuAA | YP_281521.1 | glycine betaine transport ATP-binding protein | Not tested | Not named | Protein | 1e-66 | 50 |
