Gene Information

Name : RTCIAT899_CH10315 (RTCIAT899_CH10315)
Accession : YP_007333992.1
Strain : Rhizobium tropici CIAT 899
Genome accession: NC_020059
Putative virulence/resistance : Resistance
Product : putative aliphatic sulfonates ABC import transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2089920 - 2090720 bp
Length : 801 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCGTCAACACACTCGATCGCCCACGGGCGGAAGCCAAAAATGTTGCCGCGCAGGCTGCGGGCGCTGCGGCCATCCA
TATCAAGGGTCTGGAGAAGAGTTTCGGCAACAACCGCGTCTTGCGCGGCATCGATCTCGATATTCCCGCTGGTCAATTCG
TCGCCGTCATCGGCAAGAGCGGCTGCGGCAAGAGCACGCTGCTGCGCATCCTGATGGGGCTGGAAGAGCCGAGTGCCGGT
CATCTACGCTTTGAAGCGGTCGATGGTGGTGACACTCAGCCCAATACACGCATCGTCTTTCAGGAGCCGCGGCTGCTGCC
CTGGCTTTCCGTCGCCGACAATGTTGCGGTGGGCCTGGGCGAGGGCGTGCCACAAAACGTATCGAAGAGGGAAACGGCTT
CGGTTCTCTCTGAGGTGCAGCTTGCCGAGAAGGCCGGTGAATGGCCCTCGAGCCTTTCCGGTGGGCAGAAGCAGCGCGTG
GCGCTCGCCCGTGCGCTCGTCAGCAAGCCCGGTATTCTTGCCCTCGATGAGCCGCTTGGCGCGCTGGATGCTTTGACCCG
CATCAGCATGCAGGAACTGCTGAACCGCGTCTGGCGTGAGCTCGGCTTTACCGCCGTGCTTGTGACCCACGATGTCAGCG
AAGCCGTGCATCTGGCCGATCGGGTCGTGGTGCTGGACGAGGGCCGGATCGTGCTCGATCTCGATATTCCATATCCGCAT
CCCCGCCGTCACGGCAATCCGGCGCTTGCAGAGCTCGAAGGGCAGCTGCTGGCGGCAATTCTCGGCGACGCACGGAATTA
G

Protein sequence : 
MSVNTLDRPRAEAKNVAAQAAGAAAIHIKGLEKSFGNNRVLRGIDLDIPAGQFVAVIGKSGCGKSTLLRILMGLEEPSAG
HLRFEAVDGGDTQPNTRIVFQEPRLLPWLSVADNVAVGLGEGVPQNVSKRETASVLSEVQLAEKAGEWPSSLSGGQKQRV
ALARALVSKPGILALDEPLGALDALTRISMQELLNRVWRELGFTAVLVTHDVSEAVHLADRVVVLDEGRIVLDLDIPYPH
PRRHGNPALAELEGQLLAAILGDARN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-39 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RTCIAT899_CH10315 YP_007333992.1 putative aliphatic sulfonates ABC import transporter, ATP-binding protein NC_012469.1.7686878. Protein 7e-24 41