Gene Information

Name : RTCIAT899_CH09180 (RTCIAT899_CH09180)
Accession : YP_007333768.1
Strain : Rhizobium tropici CIAT 899
Genome accession: NC_020059
Putative virulence/resistance : Unknown
Product : putative IS200/IS605 family transposase, IS200 group
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1853448 - 1853882 bp
Length : 435 bp
Strand : -
Note : -

DNA sequence :
ATGGATGAGCAAACGCTCTCGCATGCGACGTGGGACTGCAAGTATCACGTTGTTTTTGGCAGCAAATACCGCACGAAGAG
ACTCTACGGGGACGTGCGGCGTGAGTTGGGAGAACTCTTACGTCGGCTGGCACAGCAGAAAGGCTGCCAGATCGAGGAGG
GTCATCTGATGCCCGACCATGTGCATATGTTGATATCGATCCCGCCGAAATACTCGGTTTCGCATATTGTCGGCTTCTTG
AAGGGTAAGACGGCCCTTTACGTAGCGAACAAATATGCGCGCAAGCGCCGCTACAAAGGTTATCACTTTTGGGCGCGCGG
GTATTTCGTATCGACGACGGGCTACAATGAGCAGGTCGTCAGACAATATATCCGTCATCAGGAAAAGGCCGACAAAGCTT
CCGACTTTGCCGACCTCTTCAATCGTAGCTACTAA

Protein sequence :
MDEQTLSHATWDCKYHVVFGSKYRTKRLYGDVRRELGELLRRLAQQKGCQIEEGHLMPDHVHMLISIPPKYSVSHIVGFL
KGKTALYVANKYARKRRYKGYHFWARGYFVSTTGYNEQVVRQYIRHQEKADKASDFADLFNRSY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 1e-19 47
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 9e-20 47
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 8e-26 47
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 1e-22 45
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 2e-22 44