Gene Information

Name : glnA (RTCIAT899_CH08920)
Accession : YP_007333717.1
Strain : Rhizobium tropici CIAT 899
Genome accession: NC_020059
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1803961 - 1805370 bp
Length : 1410 bp
Strand : -
Note : -

DNA sequence :
ATGACGACTGCAAGCGAAATTTTGAAGCAAATCAAGGATAACGACGTCAAGTTCGTCGACCTGCGCTTCACCGATCCGAA
GGGCAAGCTGCAGCATCTCACCATGGATGTGGTCTGTGTCGACGAAGATATGTTTGCCGATGGCGTCATGTTCGACGGCT
CCTCGATTGCGGGCTGGAAGGCCATCAACGAATCCGACATGGTGCTGATGCCCGATCCGGATACGGTCCACATGGATCCA
TTCTTCGCGCAGTCGACGATGGTCATTCTCTGCGACATCCTCGACCCGATCTCCGGCGAATCCTATAACCGCGATCCGCG
CGGCACCGCCAAGAAAGCCGAAGCCTATCTCAAGGCTTCGGGTATCGGCGACACCGCCTTCTTCGGCCCGGAAGCCGAAT
TCTTCGTCTTCGATGACGTCAAGTACAAGGCCGATCCCTACAATACCGGTTTCAAGCTCGATTCGAGCGAACTGCCGTCC
AACGACGACACCGACTATGAAACCGGCAATCTCGGCCACCGTCCGCGTGTCAAGGGCGGCTACTTCCCGGTCCCGCCGAT
CGACAGCTGCCAGGACATGCGTTCGGAGATGCTGACGGTTCTGACCGAAATGGGCGTTACCGTAGAAAAGCACCACCATG
AAGTCGCAGCCGCCCAGCACGAACTCGGCATCAAGTTCGATACGCTGGTACGCAGCGCCGACGGCATGCAGATCTACAAA
TATGTCGTCCACCAGGTCGCCAATGCTTATGGCAAGACGGCAACCTTCATGCCAAAGCCGATCTTCGGCGACAACGGCTC
GGGCATGCACGTTCACCAGTCGGTCTGGAAGGGCGGCAAGCCGACCTTCGCAGGCGACGAATATGCAGGTCTTTCCGAGA
CCTGCCTCTATTACATCGGCGGCATCATCAAGCATGCCAAGGCGATCAACGCCTTCACCAACCCGTCGACGAACTCCTAC
AAGCGTCTCGTTCCGGGTTACGAAGCTCCGGTTCTGCTCGCCTATTCGGCTCGCAACCGTTCGGCTTCTTGCCGTATCCC
GTTCGGCTCAAACCCGAAGGCAAAGCGCGTCGAAGTCCGCTTCCCTGACCCGACGGCCAACCCCTATCTCGGTTTCGCCG
CCATGCTGATGGCCGGCCTCGACGGCATCAAGAACAAGATCCATCCCGGCAAGGCCATGGACAAGGATCTCTACGACCTG
CCGCCGAAGGAACTGAAGAAGATCCCGACGGTCTGCGGCTCGCTGCGCGAAGCTCTGGAAAGCCTGGACAAGGACCGCAA
GTTCCTGACCGCCGGTGGCGTTTTCGACGATGATCAGATCGATGCCTTCATCGAACTGAAGATGCAGGAAGTCATGCGCT
TCGAAATGACCCCGCATCCGGTCGAATACGACATGTACTATTCGGTCTGA

Protein sequence :
MTTASEILKQIKDNDVKFVDLRFTDPKGKLQHLTMDVVCVDEDMFADGVMFDGSSIAGWKAINESDMVLMPDPDTVHMDP
FFAQSTMVILCDILDPISGESYNRDPRGTAKKAEAYLKASGIGDTAFFGPEAEFFVFDDVKYKADPYNTGFKLDSSELPS
NDDTDYETGNLGHRPRVKGGYFPVPPIDSCQDMRSEMLTVLTEMGVTVEKHHHEVAAAQHELGIKFDTLVRSADGMQIYK
YVVHQVANAYGKTATFMPKPIFGDNGSGMHVHQSVWKGGKPTFAGDEYAGLSETCLYYIGGIIKHAKAINAFTNPSTNSY
KRLVPGYEAPVLLAYSARNRSASCRIPFGSNPKAKRVEVRFPDPTANPYLGFAAMLMAGLDGIKNKIHPGKAMDKDLYDL
PPKELKKIPTVCGSLREALESLDKDRKFLTAGGVFDDDQIDAFIELKMQEVMRFEMTPHPVEYDMYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 4e-106 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_007333717.1 glutamine synthetase, type I VFG1399 Protein 6e-112 51