Gene Information

Name : RTCIAT899_CH08125 (RTCIAT899_CH08125)
Accession : YP_007333563.1
Strain : Rhizobium tropici CIAT 899
Genome accession: NC_020059
Putative virulence/resistance : Virulence
Product : putative phage transcriptional regulator AlpA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1653592 - 1653801 bp
Length : 210 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACACGCCAACGACAATATTCCGATATTGATAAGCCTTAACGACGTCTGCCAACTAACTTCGCTCAGCCGTACGAT
GATCAACCGCCTTCGTTCAGAAGGCCGCTTTCCAGGGGCGGCAGACTTGGGGGATAGACGGGTCGCTTTCGTCCGAACTG
AAGTACTTCAGTGGATCGAGAGCAAGATAGCCTCTCGTGCCATCGCCTAG

Protein sequence : 
MKHANDNIPILISLNDVCQLTSLSRTMINRLRSEGRFPGAADLGDRRVAFVRTEVLQWIESKIASRAIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 4e-06 42
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 4e-06 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RTCIAT899_CH08125 YP_007333563.1 putative phage transcriptional regulator AlpA VFG1141 Protein 1e-06 42