Gene Information

Name : metM (RTCIAT899_CH08075)
Accession : YP_007333556.1
Strain : Rhizobium tropici CIAT 899
Genome accession: NC_020059
Putative virulence/resistance : Unknown
Product : homoserine dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1645520 - 1646839 bp
Length : 1320 bp
Strand : +
Note : -

DNA sequence :
ATGGCAGATGCCCTCAAAATCGGCATTGCGGGCTTGGGTACCGTTGGTGCCTCGCTTGTCCGCATTATCCAGAGCCGCGC
TAACGAGCTTGCCGTTACCTGCGGTCGTCCCGTCAAGATCGTCGCCGTCACGGCGCGCGATCGCACGCGGGATCGCGGCA
TCGATCTGACGGGCATCGAATGGTTTGGCGGTCCGGTCGATCTGGCGCAGAAGGCCGATATCGACGTCTTCGTCGAGCTG
ATCGGCGGTTCCGAGGGCGCGGCCAATGCAGCTGTGCGCGCAGCGCTTGCACGCGGCCTGCATGTCGTCACCGCCAACAA
GGCGCTGCTTGCCTATCACGGTGTCGAGCTCGCGCAGATCGCCGAAGAGAAGGGTGCCCTGCTGAATTTCGAAGCAGCCG
TTGCCGGTGGCATCCCGGTCATCAAGGCCCTGCGCGAATCCCTGACGGGCAATACGATTTCCCGCGTCTATGGCATCATG
AACGGCACCTGCAACTACATCCTGACCCGGATGGAGAAGGAAGGCCTGTCCTTTAGCGATTGCCTCAAGGAGGCACAGCG
TCTCGGCTATGCCGAGGCGGACCCGGCTTTCGACATCGAGGGCAATGACACGGCTCATAAGCTTGCCATCCTAACGACGC
TTGCCTTCGGCAACCGCATCGCGGCCGATGATATCTACCTCGAGGGCATCACCAACGTTTCCATCGAGGATATCCGCGCT
GCCGCCGATCTCGGCTACCGCATCAAGCTGCTCGGCGTCGCCCAGCGCACCGAAAGCGGCATCGAGCAGCGCGTGCATCC
GACCATGGTGCCGCTCGATTCAGTCATCGCACAGGTCGATGGTGTCACCAATGCCGTGGCGATCGAATCCGATATTCTCG
GCGAACTGCTGATGGTCGGCCCAGGTGCCGGCGGCAATGCCACCGCATCTTCCGTGCTCGGCGACATCGCCGATATCGCC
AAGAGCCGGCCGGGCGAGCAGCGTGTCCCGGTGCTGGGGCACCCCGCCAAGGCGCTGGAGCCCTACCGCAAGGCGCAGAT
GCAGAGCCATGAAGGCGGCTATTTCATCCGCCTGACCGTGCTTGACCGTACCGGCGTCTTTGCCAGCGTCGCGACCCGTA
TGGCGGAAAACCATATTTCGCTCGAATCGATCGTGCAGCGCTCCAAGCAGCATCTGGCGCCATCCGATCACCAGACGATC
ATCCTCGTCACCCACGCGACGACGGAGGATTCGGTGCGCAAGGCGGTTGCCTCGATCAAGAACGAAGGCTATCTCGTCGG
CGAGCCGCAGGTCATCCGTATCGAGCGTCCGAAAGAATAG

Protein sequence :
MADALKIGIAGLGTVGASLVRIIQSRANELAVTCGRPVKIVAVTARDRTRDRGIDLTGIEWFGGPVDLAQKADIDVFVEL
IGGSEGAANAAVRAALARGLHVVTANKALLAYHGVELAQIAEEKGALLNFEAAVAGGIPVIKALRESLTGNTISRVYGIM
NGTCNYILTRMEKEGLSFSDCLKEAQRLGYAEADPAFDIEGNDTAHKLAILTTLAFGNRIAADDIYLEGITNVSIEDIRA
AADLGYRIKLLGVAQRTESGIEQRVHPTMVPLDSVIAQVDGVTNAVAIESDILGELLMVGPGAGGNATASSVLGDIADIA
KSRPGEQRVPVLGHPAKALEPYRKAQMQSHEGGYFIRLTVLDRTGVFASVATRMAENHISLESIVQRSKQHLAPSDHQTI
ILVTHATTEDSVRKAVASIKNEGYLVGEPQVIRIERPKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 1e-64 42
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 1e-64 42