Gene Information

Name : RTCIAT899_CH00745 (RTCIAT899_CH00745)
Accession : YP_007332121.1
Strain : Rhizobium tropici CIAT 899
Genome accession: NC_020059
Putative virulence/resistance : Resistance
Product : streptomycin 3''-kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 153973 - 154776 bp
Length : 804 bp
Strand : +
Note : -

DNA sequence :
TTGGAATTTGTAGAAGCACTGCTTGCAAAAGCGAGCCGCGACTGGACGCGAGTGAAGACAGGCGAATCGGGAGATCTTGT
CTATCGGCGCGAAGATGGCCGTGCCTATGCGAAAATAGCAGCCTCAGCCCGATCGGCAGACCTTGCCGGCGAGCGCGACC
GGCTGCTTTGGCTGCAGGGCAAAGGCATTGCCGTGCCTGAGGTCATCGACTGGCGCGAGACGGAGGACGGTGCGTGCTTG
ATCATGACGGCGATCGCCGGTGTACCGGCCACCGATCTGGACGGAGAGACGCTGCTGAAAGCCTGGTCCTCGATGGCGCA
GCAGCTGAAAGTTCTTCACGAGCTGCCCGCAGATCAATGCCCCTTTGATCGCAGCCTGTCGCTGATGTTCGCAAAGGCGG
CGGATGTAGTTGCGCGAGATGTAGTGAACCCGGATTTTCTGCCGCCGGAGGATCAGGATAGGCCCGCCCGCGACCTGCTT
GATCGCGTCGAGCGCGATCTGCCCGTCCGGCTGGATCAGGAGGCCATCGACAGGGTTCTCTGCCATGGCGATGCCTGCAT
GCCCAACTTTATGGTCGATCCGCATAGCCTGCAATGTACCGGGCTGATCGATCTCGGCCGTGTCGGCAAGGCCGATCGCT
ATGTTGATTTCACGCTCATGATTGCCAATGCCGAGGAAAACTGGACCGCGCCAGAGCAAGGCGAACGGGCTTTTTCAATT
CTGTTTGAGACAATGGAAATCAAGAAGCCGGATCGCGAGCGTCTCGCCTTCTATCTCCGGCTCGATCCGCTAACCTGGGG
CTGA

Protein sequence :
MEFVEALLAKASRDWTRVKTGESGDLVYRREDGRAYAKIAASARSADLAGERDRLLWLQGKGIAVPEVIDWRETEDGACL
IMTAIAGVPATDLDGETLLKAWSSMAQQLKVLHELPADQCPFDRSLSLMFAKAADVVARDVVNPDFLPPEDQDRPARDLL
DRVERDLPVRLDQEAIDRVLCHGDACMPNFMVDPHSLQCTGLIDLGRVGKADRYVDFTLMIANAEENWTAPEQGERAFSI
LFETMEIKKPDRERLAFYLRLDPLTWG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
strA YP_005176180.1 aminoglycoside 3''-phosphotransferase protein Not tested ICEPmu1 Protein 3e-78 69
strA CAJ77025.1 Streptomycin phosphotransferase A Not tested AbaR1 Protein 9e-80 67
strA AEZ06049.1 StrA, APH(3')-Ib, streptomycin(3') phosphotransferase Not tested Tn6167 Protein 5e-80 66
strA AFV48000.1 streptomycin (3') phosphotransferase StrA Not tested delta-AbaR25 Protein 4e-80 66
strA ACK44539.1 StrA Not tested SGI1 Protein 4e-80 66
strA AEA34675.1 aminoglycoside phosphotransferase Not tested Not named Protein 4e-80 66
strA AFH57207.1 streptomycin resistance protein Not tested AbaR4a Protein 4e-80 66
strA AGK07031.1 StrA streptomycin phosphotransferase Not tested SGI1 Protein 4e-80 66
strA YP_001800932.1 aminoglycoside-3''-phosphotransferase Not tested Not named Protein 5e-80 66
strA AGK07089.1 StrA streptomycin phosphotransferase Not tested SGI1 Protein 4e-80 66
strA AEQ20909.1 StrA, APH(3')-Ib streptomycin(3') phosphotransferase Not tested Tn6166 Protein 5e-80 66
strA AFV47972.1 streptomycin (3') phosphotransferase StrA Not tested AbaR25 Protein 4e-80 66
BJAB0868_00286 YP_008211612.1 Aminoglycoside phosphotransferase Not tested AbaR26 Protein 2e-79 66
ABK1_0266 YP_005512838.1 StrA Not tested AbaR4d Protein 6e-80 66
BJAB07104_00282 YP_008207747.1 Aminoglycoside phosphotransferase Not tested AbaR25 Protein 6e-80 66
ABZJ_00266 YP_005524222.1 hypothetical protein Not tested AbaR22 Protein 6e-80 66
ABK1_0258 YP_005512830.1 StrA Not tested AbaR4d Protein 6e-80 66

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RTCIAT899_CH00745 YP_007332121.1 streptomycin 3''-kinase AF024602.1.gene5.p01 Protein 2e-80 66
RTCIAT899_CH00745 YP_007332121.1 streptomycin 3''-kinase DQ336355.1.orf1.gene Protein 6e-44 47