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Name : lysS (DESAM_10054) Accession : YP_007324141.1 Strain : Desulfovibrio hydrothermalis DSM 14728 Genome accession: NC_020055 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 43698 - 45293 bp Length : 1596 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12682299, 14623972, 20649968; Product type e : enzyme DNA sequence : TTGAGCGGCAAGAAAAAGAAGCAAATAAAGCTGGCAACCAAATCAGAGCATGTGGCAACATTTATGCCCCTGCTTGAGGC TCTGCAAGCTCAGAACGAACTCAATCAGGTTCTGAAGAATCGTGTAGAAAAAGCATGTACTCTTCTTGATGAAGGTGTAG CTCTCTATCCCAACGACTTCAGCAAAGATACAGATGTCTCAGATATTTGGGACAATTATGACAACCTCGGAGGAGAAGAG CTTGAAGCTCTCGGCAAGAAATTTAAAATTGCCGGCAGGGTTATTACCCACCGCTCCTTCGGTAAGGTGGCATTCTTTCA TCTTCAGGATCCGACCGGCAGGGTTCAGGTCTACGTAGCCAGGGATGACCTCGGCCCTGATCTGTATAAAATTTTTAAAA AATTCGATATCGGCGACATTGTCGGCGTTGAAGGCGAGCTATTCAGAACCAAAACTGATGAACTGACCCTTAAAGCTTAC AAGGTCGACCTTATTACAAAATCCATGCGTCCGCTTCCTGAGAAGTATCACGGATTGAAGGATGTTGAGACCAGATATCG GCAGCGTTATGTCGACCTGATCGTTACACCTAAAGCACGTGAAATCTTTCAGAAAAGAACTAAGATTGTAAGGGCTCTCC GTAACTATCTTGATAATAAAGGTTTTATGGAAGTTGAGACCCCGATGATGCAGCCTATTCCGGGCGGAGCAGCAGCAAGG CCTTTTGAGACTCACCATAATGCACTTGATATGAAGCTTTATCTGCGCATTGCCCCGGAGCTTTACCTTAAGCGTCTACT TGTCGGCGGGTTTGAGAAGGTTTATGAGATCAACCGTAACTTCCGCAATGAAGGAATCTCCATCAGGCATAACCCTGAAT TCACAATGCTTGAGTTCTACTGGGCCTATGCAAACTTTGAAGACCTCATGGATCTTACTGAAGATATGATCTCGTCAGTC TGTAAAGACGTAAATGGTGACACTAAAATTGAATATCAGGGTGAAAAGATAGATCTTACACCCGGCGCATGGCATCGCGT CGCTTTTCATGAATCTCTGGAGACAATCGGCAACGTAGCTCCTGAAATATATGAAGATTATGACAAGTGTAAAGAGCTGG TGAAAAAGCTTGGCGAGAAAGCTGTAGAAGGCGAAAAACTCGGCAAGCTGCAGGCTAAGTTGTTTGATCTGCTGGTTGAA CCCAAGCTGATGCAGCCTCACTTTATCTATCACTACCCGACTGATATTTCTCCTCTTTCAAGAAGAAATGAAGAAAATCC GGATATAACAGACCGTTTTGAACTGTTTATTTACGGTCGTGAACTGGCAAATGCATTTTCAGAACTTAACGATCCCGTGG ACCAGCGTTGCCGGTTCATGGAGCAGGTCGCAGAAAAAGATGCTGGAGATGATGAGGCTCATCACATGGATGAGGATTAT GTTCGTGCGCTTGAGTACGGCATGCCTCCGGCAGCAGGACAGGGTATCGGTATCGATAGACTCGTTATGCTGCTGACGGA CAGTGCCTCCATCAGAGAAGTTATTCTGTTTCCTCTCCTCAGGGCTGAAGCCGGTTCCGGCACTGGTGGCGCATGA Protein sequence : MSGKKKKQIKLATKSEHVATFMPLLEALQAQNELNQVLKNRVEKACTLLDEGVALYPNDFSKDTDVSDIWDNYDNLGGEE LEALGKKFKIAGRVITHRSFGKVAFFHLQDPTGRVQVYVARDDLGPDLYKIFKKFDIGDIVGVEGELFRTKTDELTLKAY KVDLITKSMRPLPEKYHGLKDVETRYRQRYVDLIVTPKAREIFQKRTKIVRALRNYLDNKGFMEVETPMMQPIPGGAAAR PFETHHNALDMKLYLRIAPELYLKRLLVGGFEKVYEINRNFRNEGISIRHNPEFTMLEFYWAYANFEDLMDLTEDMISSV CKDVNGDTKIEYQGEKIDLTPGAWHRVAFHESLETIGNVAPEIYEDYDKCKELVKKLGEKAVEGEKLGKLQAKLFDLLVE PKLMQPHFIYHYPTDISPLSRRNEENPDITDRFELFIYGRELANAFSELNDPVDQRCRFMEQVAEKDAGDDEAHHMDEDY VRALEYGMPPAAGQGIGIDRLVMLLTDSASIREVILFPLLRAEAGSGTGGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-118 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007324141.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-118 | 51 |
