Gene Information

Name : fliI (DESAM_23031)
Accession : YP_007327397.1
Strain : Desulfovibrio hydrothermalis DSM 14728
Genome accession: NC_020055
Putative virulence/resistance : Virulence
Product : flagellar-specific ATPase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.14
Position : 3446215 - 3447528 bp
Length : 1314 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12787361, 16113269, 16780875, 17002279; Product type e : enzyme

DNA sequence :
ATGGCAGACATGAAGGGATGTACTGAACTTCTCTCAGCAATAGATCCATGCCGCAGCTATGGAAAAGTAAGCAAAGTGGT
CGGACTTATTGCCGAAGGCAAAGGAATTAAAGCACCGCTTGGTTCTGTGTGCCATCTCGTGGCTGAAGGAATAGAAAAGC
CTATTCCGGCCGAAGTTGTCGGTTTTAAGGATGGAGCATGCCTGTTTATGCCTTATGGCGAACTTCATGGCATCAGCCCC
GGAAGCCTGATCAAAAACTCCAGTGCACCTCCAGAAGTTCCTGTAGGCATGAACCTTTTAGGACGCGCAGTTGATGCTTT
CGGTCAGCCCATTGACGGCAAAGGCCCAATTATCCCGGAAAGCTTTAATCCACTTCACCGAGATCCCCCTAACCCCTTAG
AACGACCTCGTATCAACGAACCGCTTGATGTCGGAGTCAAAGCTATCAACAGCCTGCTGACCCTCGGTAAGGGCCAGCGT
ATGGGTATTATGGCCGGTTCCGGTGTCGGAAAGTCGACACTGCTCAGTATGATGGCCCGCTACACCCTTGCTGATATCAA
CGTCATTGCTCTTATAGGTGAACGCGGCAGAGAGGTTGTGGAATTTATTGAACGAGACCTCGGCCCCGAGGGCCTTGCAC
GATCAATTCTCGTTATTGCAACATCTGACAAAAGTCCGCTTATCCGTATGCGTGCGGCCTATACAGCGACAGCCATTGCT
GAATATTTTCGCGACCTGAATAAAGATGTACTGTTGATGATGGACTCAGTAACCAGATTTGCCATGGCCGGCAGAGAAGT
AGGTCTGGCTGCCGGCGAACCGCCCACCCGCGGCGGCTACACCCCTTCAGTTTTCGCACAACTTCCCAAACTTCTGGAAC
GCGCCGGTAAAAACCGTAACGGCTCCATTACCGGAATATATACCGTGCTTGTCGATGGTGACGATTTTACAGAACCCATT
GCCGATGCAACACGCTCTATTCTTGATGGACATATTGTTCTAACCCGCGACCTAGCGGATCAGGGGCACTACCCCTGTAT
TGATGTTCTTAAAAGCGTCAGCAGGGTTCGCGGCGATATTGTACAAAACGAAATAGTTGCGGCAGGCAGAAAAGTACTGG
GACAACTTGCCACATTCAGAAAAGTTGAAGACATGGTAAATATTGGTGCATATCAGTCCGGTGCAAATCCTGATATTGAT
ACTGCTATTAAAATGCAGCCTGCAATTAACGGATTCCTGCAACAGCTTGTTGAAGAAAAACAAACTCTTGATGAAAGCTT
TAACCTGCTGATGAAGCTTGCTGAACCAGATTAA

Protein sequence :
MADMKGCTELLSAIDPCRSYGKVSKVVGLIAEGKGIKAPLGSVCHLVAEGIEKPIPAEVVGFKDGACLFMPYGELHGISP
GSLIKNSSAPPEVPVGMNLLGRAVDAFGQPIDGKGPIIPESFNPLHRDPPNPLERPRINEPLDVGVKAINSLLTLGKGQR
MGIMAGSGVGKSTLLSMMARYTLADINVIALIGERGREVVEFIERDLGPEGLARSILVIATSDKSPLIRMRAAYTATAIA
EYFRDLNKDVLLMMDSVTRFAMAGREVGLAAGEPPTRGGYTPSVFAQLPKLLERAGKNRNGSITGIYTVLVDGDDFTEPI
ADATRSILDGHIVLTRDLADQGHYPCIDVLKSVSRVRGDIVQNEIVAAGRKVLGQLATFRKVEDMVNIGAYQSGANPDID
TAIKMQPAINGFLQQLVEEKQTLDESFNLLMKLAEPD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 5e-95 50
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-94 50
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 1e-94 50
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 1e-94 50
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-92 50
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-92 50
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-94 49
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-95 49
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 2e-95 49
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-93 49
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-78 49
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-78 49
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-80 49
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-74 48
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-74 48
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-75 48
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-74 48
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-74 48
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 1e-67 46
escN CAI43874.1 EscN protein Virulence LEE Protein 6e-84 46
escN NP_290268.1 hypothetical protein Virulence LEE Protein 7e-83 46
ECs4568 NP_312595.1 EscN Virulence LEE Protein 7e-83 46
escN AAC31513.1 L0034 Virulence LEE Protein 5e-83 46
escN YP_003236088.1 translocator EscN Virulence LEE Protein 5e-83 46
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 5e-83 46
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 9e-84 46
escN AAK26715.1 EscN Virulence LEE Protein 2e-83 46
escN YP_003223475.1 translocator EscN Virulence LEE Protein 9e-84 46
escN AAL57542.1 EscN Virulence LEE Protein 2e-83 46
escN CAC81862.1 EscN protein Virulence LEE II Protein 8e-84 46
escN AAC38383.1 EscN Virulence LEE Protein 9e-83 45
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-81 45
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-68 44
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-71 44
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 2e-71 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 3e-78 44
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-78 44
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 5e-79 44
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 3e-70 44
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 4e-85 44
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 8e-73 43
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 9e-67 42
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 9e-67 42
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 1e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_007327397.1 flagellar-specific ATPase VFG2144 Protein 1e-92 52
fliI YP_007327397.1 flagellar-specific ATPase VFG0048 Protein 8e-95 51
fliI YP_007327397.1 flagellar-specific ATPase VFG0390 Protein 2e-93 50
fliI YP_007327397.1 flagellar-specific ATPase VFG1254 Protein 8e-95 50
fliI YP_007327397.1 flagellar-specific ATPase VFG2499 Protein 4e-89 50
fliI YP_007327397.1 flagellar-specific ATPase VFG2331 Protein 1e-87 49
fliI YP_007327397.1 flagellar-specific ATPase VFG0192 Protein 2e-95 49
fliI YP_007327397.1 flagellar-specific ATPase VFG0515 Protein 5e-75 48
fliI YP_007327397.1 flagellar-specific ATPase VFG0812 Protein 3e-83 46
fliI YP_007327397.1 flagellar-specific ATPase VFG0730 Protein 5e-83 45
fliI YP_007327397.1 flagellar-specific ATPase VFG1778 Protein 2e-66 45
fliI YP_007327397.1 flagellar-specific ATPase VFG1008 Protein 7e-67 43
fliI YP_007327397.1 flagellar-specific ATPase VFG2459 Protein 7e-68 41