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Name : DESAM_20023 (DESAM_20023) Accession : YP_007324420.1 Strain : Desulfovibrio hydrothermalis DSM 14728 Genome accession: NC_020055 Putative virulence/resistance : Virulence Product : putative type-1 restriction system, restriction subunit Function : - COG functional category : - COG ID : - EC number : - Position : 305815 - 308784 bp Length : 2970 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology DNA sequence : ATGAAATTTACAGATACAAGCGAAGCAGGTCTTGAGACCACTATCGTCAAATCATTAATTGAAGACTCCGGTTACAGTGA GGGAGCCCCTCAGGATTATGACCGTTCCCATGCGGTTGATCTTATTAAACTAACCAATTTTATTGAGGCTACACAGCCGG AAGTTGCTGATCGCCTTAGCCTTAAAGTAGATTCTCCCACAAGAACAAAATTCCTCCACCGATTACAAGGCGAGATAGCC AAACGGGGCATCATCGATGTGCTACGCAAAGGGGTGAAGCACGGCCCGGATTCCGTCACGCTCTTTTATGGCAGCCCGAC AGCAAAGAATGAAAAGGCCAGGGAACTTTTTGATCAGAACATTTTTAGTGTGACGCGGCAACTGCGCTACAGCAACAGTA ACACACAATTGGCACTTGATATGGGTATCTTTATCAACGGCCTTCCTGTTGCTACATTTGAATTGAAAAACAAACTCACC AAACAGACCGTTCACGACGCAGTTCAACAATACAAAAATGACCGCGATCCCAAAGAACTGCTTTTTCAGTTTGGCCGTTG CATGGTTCACTTTGTGGTGGATGACCATGAAGTTCGCATGTGCACTCATCTAAAGGGCAAGGCATCCTGGTTCCTTCCGT TTAACAAAGGGCACAATGATGGTGCAGGCAACCCGCCAAATCCTGCAGGACTGGCTACGGATTACCTCTGGAAAGAGATC CTTAACAAAGAGCGTCTTACTGATATCCTTGAAAACTACGCCCAGGTTGTTGAGGAAAAAGACGAAAAGACGGGTAGAAA AAGATACAAACAGATATTCCCACGCTATCATCAGTTGGATGTGGTGCGTAAATTGCTGTCTGATGTCAAAAAAAATGGTG TTGGAAAACGCTATCTGATTCAGCATTCGGCAGGAAGTGGAAAATCAAACTCTATTGCATGGCTGGCGCATCAGCTGGTT GGATTGGAAAAAGACAAAAATCCCATCCTTGACTCAATAATCGTGGTGACCGACCGTCGGGTTCTGGACAAGCAGATCCG TGACACCATCAGGTCCTTTGCTCAGGTTGGCAACGTGGTTGGTCATGCGGACCGCTCCGGTGACCTGCGCCGTTTTATTA ATGAAGGCAAGCAGATCATCATAACCACAGTTCAGAAATTTCCTTTTATTCTGGCAGAGATTGGTGACGACCACAGACAA AATAAGTTTGCCATTATCATTGATGAAGCACACTCCAGCCAGGGTGGACGTACTGCTTCAAAAATGAATATGGCGCTTTC TGCAGATGTCTCTGATTCAGATGAAGAAGAAAGTACAGAGGATAAGATCAATGAGTTGATGGAAGGTCGCAAGATGCTGA CCAACGCCAGCTATTTTGCCTTTACTGCCACGCCCAAAAATAAAACACTTGAAATTTTTGGTGAGCCTTCCCCTCAGCCA GATGGGAAAGTAAAGCATTATCCTTTTCAAAGCTACACGATGAAACAGGCCATTCAGGAAGGGTTTATTCTGGATGTGCT TAAGAACTATACACCTGTGGAAAGTTTTTACCGTCTTTCAAAAACTGTAGAAGACGATCCTCTTTTTGACACCAAAAAAG CCCAGAAAAAGCTTCGTAAATATGTGGAATCCAATACTCATGCCATTCGTGAGAAAGCTGAAATCATGGTGGATCATTTC CATGCACAGGTGATGGGACACCGTAAAGTTGGTGGACAGGCGCGTGTTATGGTTATTACCAGCGGCATCATGCGGGCCAT CGAATATTTCTATGCCATAAACGACTATTTGCTTAACAAAAAATTACCTTATAAAACCATTGTGGCTTTCTCAGGCGAAC ATGAATATGGAGGCCAGAAAGTTACAGAAGCCTCATTGAACGGTTTTCCCAGTAACAAGATTGAAGATAAGATTACTGAA GATCCCTATCGAATTCTTGTTGTTGCCGATAAATTTCTTACCGGATATGACGAACCGTTGATGCATACCATGTATGTAGA TAAGCCACTTGCAGGTATTAAGGCTGTTCAAACTTTATCGCGTTTGAACCGGGCACACCCAAAAAAACATGACACTTTTA TTCTGGATTTTTTCAATGATGCTGATGTGATTCAGAAGGCATTTTCTGATTATTACCGCACAACCATTCTCAGTGAAGAA ACAGACCCCAATAAGCTGCATGATCTTAAATCGGATTTGGATAGCTATCAGGTTTATTCACAGGAACAGATTGACCGATT GGTGGAACTTTATCTTGGGGGAGCTGAAAGAGAAACTCTTGACCCTGTTCTTGATGCCTGTGTTGCTGTGTACAACAGTG AACTTGATGAAGATGGGCAAGTTGATTTCAAAGGTAAGGCAAAAGCGTTTGTTCGAACCTACGGTTTTCTTGCTTCAATT CTTCCCTTTACAAATCCCGATTGGGAAAAACTATCAATCTTTCTGAATTTTCTTATTTCTAAACTTCCCGCCCCAAAAGA GGAAGACCTTTCAAAAGGAATTCTTGAAACCATCGATATGGATAGTTACCGGGCTGAAGTTCAGGCCAGTATGAATATTA CTCTAGCAGATGGAGATGCAGAACTTGACGCTGTTCCAACAACTGGCGGCGGCCGAAAGCCAGAACCGGAACTGGATCAG CTAAGCAATATCATCAAAACCTTTAATGATCTTTTTGGGAACATCGATTGGAAAGACGCAGATAAAATTCGAAAAGTCAT TGCTGAAGAAATACCTGATAAAGTTGCTGCGGACTCTGCGTATCAGAATGCCATGAAAAATTCTGACAAACAGAATGCCC GCATCGAACATGACAAGGCACTTGGTCGTGTAATGGTGGAATTAATTGCTGACCATACAGAACTCTTCAAACAGTTCAGC GACAATCCGTCATTTAAAAAATGGCTGGGGGATACCATTTTTGGCGTAACCTATCAATCGACTGATCAAATCGGAACGGG GGCGAGATAG Protein sequence : MKFTDTSEAGLETTIVKSLIEDSGYSEGAPQDYDRSHAVDLIKLTNFIEATQPEVADRLSLKVDSPTRTKFLHRLQGEIA KRGIIDVLRKGVKHGPDSVTLFYGSPTAKNEKARELFDQNIFSVTRQLRYSNSNTQLALDMGIFINGLPVATFELKNKLT KQTVHDAVQQYKNDRDPKELLFQFGRCMVHFVVDDHEVRMCTHLKGKASWFLPFNKGHNDGAGNPPNPAGLATDYLWKEI LNKERLTDILENYAQVVEEKDEKTGRKRYKQIFPRYHQLDVVRKLLSDVKKNGVGKRYLIQHSAGSGKSNSIAWLAHQLV GLEKDKNPILDSIIVVTDRRVLDKQIRDTIRSFAQVGNVVGHADRSGDLRRFINEGKQIIITTVQKFPFILAEIGDDHRQ NKFAIIIDEAHSSQGGRTASKMNMALSADVSDSDEEESTEDKINELMEGRKMLTNASYFAFTATPKNKTLEIFGEPSPQP DGKVKHYPFQSYTMKQAIQEGFILDVLKNYTPVESFYRLSKTVEDDPLFDTKKAQKKLRKYVESNTHAIREKAEIMVDHF HAQVMGHRKVGGQARVMVITSGIMRAIEYFYAINDYLLNKKLPYKTIVAFSGEHEYGGQKVTEASLNGFPSNKIEDKITE DPYRILVVADKFLTGYDEPLMHTMYVDKPLAGIKAVQTLSRLNRAHPKKHDTFILDFFNDADVIQKAFSDYYRTTILSEE TDPNKLHDLKSDLDSYQVYSQEQIDRLVELYLGGAERETLDPVLDACVAVYNSELDEDGQVDFKGKAKAFVRTYGFLASI LPFTNPDWEKLSIFLNFLISKLPAPKEEDLSKGILETIDMDSYRAEVQASMNITLADGDAELDAVPTTGGGRKPEPELDQ LSNIIKTFNDLFGNIDWKDADKIRKVIAEEIPDKVAADSAYQNAMKNSDKQNARIEHDKALGRVMVELIADHTELFKQFS DNPSFKKWLGDTIFGVTYQSTDQIGTGAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1765 | NP_231400.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 9e-175 | 43 |
| VC0395_A1363 | YP_001217306.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 9e-175 | 43 |
| VPI2_0013c | ACA01830.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 1e-174 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DESAM_20023 | YP_007324420.1 | putative type-1 restriction system, restriction subunit | VFG1098 | Protein | 4e-175 | 43 |
