Gene Information

Name : DESAM_21879 (DESAM_21879)
Accession : YP_007326253.1
Strain : Desulfovibrio hydrothermalis DSM 14728
Genome accession: NC_020055
Putative virulence/resistance : Virulence
Product : Type VI secretion protein, VC_A0107 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2268541 - 2269023 bp
Length : 483 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAAAAGAAGGCTCAGTAGCCCCCAAAGAAAGGGTGAACATAGTTTATAAACCGGAAACAGGTAACGCTAAAGAAGA
AGTTGAACTTCCTCTTAAGCTCTTGGTCATTGGGGATTTCTCCCAAAAGGATGATGACAGCATGGTCGAGGACCGTGATC
CCGTTAACATTGATAAAGATAATTTTAACGAGGTGCTTAAAGCTCAGGATCTGGAGCTTACGCTTGGAGTTGATAATAAA
CTCACTGATGAAGCTGACGCACAGATGGCTGTGAATCTTAAGTTTGAAAGTCTAAAGGATTTTGACCCTGACCGGATAAT
TAAACAGGTTCCTGAATTGCAGAAGCTTATGGAACTGCGTGAAGCTTTAAAGGCACTTAAAAGTCCGCTCTCCAACGTGC
CGGAGTTCAGGAAGAAGGTGCAGAGTCTGGTTAAGGATGCCGGAGCACGTGAACGTCTGCTTAAAGAACTTGGAATCGAG
TAA

Protein sequence : 
MAKEGSVAPKERVNIVYKPETGNAKEEVELPLKLLVIGDFSQKDDDSMVEDRDPVNIDKDNFNEVLKAQDLELTLGVDNK
LTDEADAQMAVNLKFESLKDFDPDRIIKQVPELQKLMELREALKALKSPLSNVPEFRKKVQSLVKDAGARERLLKELGIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 2e-26 48
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-26 45
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 9e-27 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DESAM_21879 YP_007326253.1 Type VI secretion protein, VC_A0107 family VFG2474 Protein 3e-38 57
DESAM_21879 YP_007326253.1 Type VI secretion protein, VC_A0107 family VFG2092 Protein 2e-37 55