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Name : capD (DESAM_20957) Accession : YP_007325345.1 Strain : Desulfovibrio hydrothermalis DSM 14728 Genome accession: NC_020055 Putative virulence/resistance : Virulence Product : Capsular polysaccharide biosynthesis protein CapD Function : - COG functional category : - COG ID : - EC number : - Position : 1295863 - 1297734 bp Length : 1872 bp Strand : - Note : - DNA sequence : ATGATCCACAACCTTCGTAATGCTAATTTTTATATGATGGTCCTTATAGATCTGTTAGTCTTTATAACTGCTTTTTACGG GGCCTATCTTTTCCGCTTTGATTTCGGATTACCGGCATATGCAGAGATACAGTTTTATGAACTTCTCAAATACACCGTAA TCATCAAATTTTCTGTATTTCTAGGCCTTGGACTGTATCGGGGCATGTGGCGTTATACCAGCCTGCGTGACCTTTGGCAT ATCCTTGAGGCCACTTTTCTCCAGTCCCTGATTCTGGTCACGGTAGTTCTATACAAATTCGGTTTTGACGGATTTTCACG CGGAATTTTCATCATCGACTGGATGCTCACTGTTTTCATGTGCGGTGGATTCAGGGTTCTTATCCGCTCCTTTTATGCAT ACCGAGACGGAAATGCCATTACACTCTCCCCGGAATCCTGTCCCGATAACGGCAGCAACGTGTTGATCATCGGAGCAGGA AGAGCCGGAGAAAAAGTTGTCCGTGAAATTAAAGGAAGTGGACAGCTCAAATATTCCCCTGTTGGATTCCTTGACAATGA CAAATCCAAACGAGGACGGACCATCCACGGAGTTCCTGTTCTGGGACAACTTTCCGACCTGCATGATCTGGTTGAAAACA AATGCGTTAACGAAATACTTATCGCTGTTGCCGAGGCTTCCGGCGAACAGATGCGCGAAATAATCGACAATTGCAAAAAG ACCGGACTGCCCTATAAAATTCTGCCCGGAATGGATGAAATCATCAACGGCAAGGTAGGCATCAAGGCCCTGCGAGATGT AAGTTATCAGGATCTGCTTGGCCGCTCTCAAGTACAGCTTGATACCACAAGCATCAGCAAATACCTGTCCGGCAAAACCG TTCTGGTAACCGGATGCGGCGGCTCTATCGGCTCGGAGCTGGTACGGCAGGTTGTGCGCTTCAAACCGGCAAAGATCATT TTAGTTGATGCCAGTGAAGCCAACCTTTACGGCATTCAAATGGAACTGCATCATGAGCTGAAATTTCATGACTATGTAAC AGTGCTCGGGTCAGTGCAGGATTTTGAACTTCTGGACAGCACCTTCGAGAAATACAAACCGCATACGATCTTTCACGCAG CGGCTTATAAACATGTCCCCATGATGGAGCGTAACCCGTGGCAGGCGGTGCAAAATAATATCTGCGGAACCAGAAATGTT ATGACCGCAGCAGATAAACACGGCGTTGACCGTTTTGTTATCGTCTCAACCGATAAGGCTGTGCGCCCAACCAATATTAT GGGTGCGTCCAAACGGGTGACAGAACTGCTCATGCACCTCTTTCCCAACTCCAAAACAACTTTCATGGCTGTCAGATTCG GCAACGTTGTAGGATCATCGGGATCAGTTGTCCCCCTTTTCCGCAGACAGATTGAAAAAGGCGGACCGGTAACCGTTACC CACCCCAACGTGACCCGCTATTTCATGTCCATTTCAGAAGCTGCCCAGCTTATTTTGCAGGCCGGAGTTATGGCTGAGGG CGGCGAGATTTTTATTCTTGAAATGGGACTGCCCGTAAAAATAGCCGACATGGCCCGTGACCTGATTCGTCTTTCCGGCA AGGAGCCTGACAAAGATATCGAAATAGTATTCACAGGACTGCGTGAAGGTGAAAAACTCTATGAAGAATTAATCACCGAC GGCGAAGATATTGTCCGCACTGAGCATGACAAAATCATGGTCCTTAAAGCCTTTGAAAATGACCATGAAAAATATGCTGC TGATTTAAAAGAAAAATTAAACAACATGATGGCTGCAGCAGACGAGCTTGATGGCAAAGCAGTCAGAGAACAGCTGCATA AGACTGTTCCTGAATTTGATGAAGAAGGCTAA Protein sequence : MIHNLRNANFYMMVLIDLLVFITAFYGAYLFRFDFGLPAYAEIQFYELLKYTVIIKFSVFLGLGLYRGMWRYTSLRDLWH ILEATFLQSLILVTVVLYKFGFDGFSRGIFIIDWMLTVFMCGGFRVLIRSFYAYRDGNAITLSPESCPDNGSNVLIIGAG RAGEKVVREIKGSGQLKYSPVGFLDNDKSKRGRTIHGVPVLGQLSDLHDLVENKCVNEILIAVAEASGEQMREIIDNCKK TGLPYKILPGMDEIINGKVGIKALRDVSYQDLLGRSQVQLDTTSISKYLSGKTVLVTGCGGSIGSELVRQVVRFKPAKII LVDASEANLYGIQMELHHELKFHDYVTVLGSVQDFELLDSTFEKYKPHTIFHAAAYKHVPMMERNPWQAVQNNICGTRNV MTAADKHGVDRFVIVSTDKAVRPTNIMGASKRVTELLMHLFPNSKTTFMAVRFGNVVGSSGSVVPLFRRQIEKGGPVTVT HPNVTRYFMSISEAAQLILQAGVMAEGGEIFILEMGLPVKIADMARDLIRLSGKEPDKDIEIVFTGLREGEKLYEELITD GEDIVRTEHDKIMVLKAFENDHEKYAADLKEKLNNMMAAADELDGKAVREQLHKTVPEFDEEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-86 | 44 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-83 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| capD | YP_007325345.1 | Capsular polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 2e-88 | 45 |
