Gene Information

Name : FAES_3332 (FAES_3332)
Accession : YP_007321933.1
Strain : Fibrella aestuarina BUZ 2
Genome accession: NC_020054
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4122336 - 4123073 bp
Length : 738 bp
Strand : +
Note : -

DNA sequence :
ATGACCGATGCGGCCCGGCGCGCCATTGCCCATTTATACCCCTATTCACCCATGTCCACGAAACCGCATCTGCTGGTTGT
TGAAGACGAAATTAAAGTAGCAGCCGCCCTGAAGAAAGGGCTGGAAACGCAGGCCTACGCCGTTGACGTGGCCAACGACG
GCCGTGAAGGCAAACGGCTGCTGGGGGTCAACCGCTACGACCTGGTGATCCTCGACGTAAACCTGCCGTTTGTGAGCGGC
CTCGAACTGGCCGAATACGCCCGTAGCAAAAACGATCGCCTGCCTATTCTGATGCTGACGGCCCTGGATACGACCACCGA
TAAAGTGCAGGGCTTCGACGCCGGGGCCGACGATTACCTGGCCAAGCCCTTTGCCTTTGCCGAATTGTTTGCCCGCGTGA
AAGCGCTGCTGCGCCGCGCCGTGCCCGCCGAGCCCGACCCCGTTCTGGCCTTTGCCGACCTCGAACTCGACCGGTTGGGC
AAGGTGGCGCGTCGGCAAGGACTGACCATCGAACTGACCGCCCGCGAATTTGCCCTGCTCGAATACTTCATGCGCAACGC
CGGCCGGGTCCTGTCGCGCGCCGACATCGCCGAGCAGGTCTGGGACATCGGGTTCGACACCGGCACCAACGTGATCGACG
TGTACGTGAATTACCTCCGCAACAAAATCGACAAGCCCTTCGCCACCAAGCTGATCCACACCGCCGTGGGCATGGGGTAT
GTGTTGAAAGAAAAATAA

Protein sequence :
MTDAARRAIAHLYPYSPMSTKPHLLVVEDEIKVAAALKKGLETQAYAVDVANDGREGKRLLGVNRYDLVILDVNLPFVSG
LELAEYARSKNDRLPILMLTALDTTTDKVQGFDAGADDYLAKPFAFAELFARVKALLRRAVPAEPDPVLAFADLELDRLG
KVARRQGLTIELTAREFALLEYFMRNAGRVLSRADIAEQVWDIGFDTGTNVIDVYVNYLRNKIDKPFATKLIHTAVGMGY
VLKEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-38 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FAES_3332 YP_007321933.1 two component transcriptional regulator, winged helix family BAC0125 Protein 9e-48 51
FAES_3332 YP_007321933.1 two component transcriptional regulator, winged helix family BAC0111 Protein 7e-48 50
FAES_3332 YP_007321933.1 two component transcriptional regulator, winged helix family BAC0083 Protein 5e-43 48
FAES_3332 YP_007321933.1 two component transcriptional regulator, winged helix family BAC0197 Protein 3e-41 48
FAES_3332 YP_007321933.1 two component transcriptional regulator, winged helix family BAC0347 Protein 3e-41 48
FAES_3332 YP_007321933.1 two component transcriptional regulator, winged helix family BAC0638 Protein 2e-38 48
FAES_3332 YP_007321933.1 two component transcriptional regulator, winged helix family BAC0308 Protein 5e-43 47
FAES_3332 YP_007321933.1 two component transcriptional regulator, winged helix family U82965.2.orf14.gene. Protein 2e-28 42
FAES_3332 YP_007321933.1 two component transcriptional regulator, winged helix family Y16952.3.orf35.gene. Protein 7e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FAES_3332 YP_007321933.1 two component transcriptional regulator, winged helix family VFG1390 Protein 4e-45 46
FAES_3332 YP_007321933.1 two component transcriptional regulator, winged helix family VFG0596 Protein 4e-38 43
FAES_3332 YP_007321933.1 two component transcriptional regulator, winged helix family VFG1389 Protein 1e-37 41