Gene Information

Name : FAES_3074 (FAES_3074)
Accession : YP_007321676.1
Strain : Fibrella aestuarina BUZ 2
Genome accession: NC_020054
Putative virulence/resistance : Virulence
Product : Transcriptional activator protein czcR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3825063 - 3825752 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence : 
ATGAGAAAAATTGTGATTATTGAAGACGACCGCCGGATTGCCCAGAACATCAGCCGGGGCCTGCAACAGGAAGGCTATGC
CACCGAGGTTGTCTACGAAGGCGAAAACGGGCGGCAACTGGCCCTGCGCCCGGAGGTGGAACTGGTGATTCTGGATCTGA
CCCTGCCGGGGATCAGCGGTTTCGAGGTGTGTCGGTCGGTGCGGGCCGAGCGCCCCCATCTGCCGATCATTATGCTGACG
GCGTTGAGCGAGGTCGAGGATAAAATCGAAGGGCTGTCGTTGGGGGCCGATGATTACATGGTGAAGCCCTTCGACCTGCG
CGAGCTAATTGCCCGGGTAGCCACCTGTTTCCGGCGGGCCGATCTGCGGCAGGAACAGAAAACCGACGACGTCTGGCAGG
TCGCGAACCTGACCGTCAACGTCGATAAAAAAGAAGTAAAACGGGGCGACGTGGTCATTGACCTGACCGCCCGCGAATTT
GCCCTGCTCGAGTACCTGATCCGAAATCGGGGGCGGGTGCTGGCCAAAATCGACATTGCCGAGACGGTCTGGGGCCTCAA
TTTCGACCCCGGCACCAACGTCGTGGAGGTCTACATCAATTACCTGCGCAAGAAAATAGACCGCGATTTCGACCCCAAGC
TCATTCATACCCGGCCCGGCATGGGCTATGTGCTGAAAGAGGAAGCATGA

Protein sequence : 
MRKIVIIEDDRRIAQNISRGLQQEGYATEVVYEGENGRQLALRPEVELVILDLTLPGISGFEVCRSVRAERPHLPIIMLT
ALSEVEDKIEGLSLGADDYMVKPFDLRELIARVATCFRRADLRQEQKTDDVWQVANLTVNVDKKEVKRGDVVIDLTAREF
ALLEYLIRNRGRVLAKIDIAETVWGLNFDPGTNVVEVYINYLRKKIDRDFDPKLIHTRPGMGYVLKEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-36 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FAES_3074 YP_007321676.1 Transcriptional activator protein czcR BAC0638 Protein 5e-34 46
FAES_3074 YP_007321676.1 Transcriptional activator protein czcR BAC0083 Protein 2e-42 45
FAES_3074 YP_007321676.1 Transcriptional activator protein czcR BAC0125 Protein 3e-45 43
FAES_3074 YP_007321676.1 Transcriptional activator protein czcR HE999704.1.gene1528. Protein 3e-35 43
FAES_3074 YP_007321676.1 Transcriptional activator protein czcR BAC0197 Protein 2e-38 43
FAES_3074 YP_007321676.1 Transcriptional activator protein czcR BAC0308 Protein 8e-40 42
FAES_3074 YP_007321676.1 Transcriptional activator protein czcR BAC0111 Protein 3e-46 42
FAES_3074 YP_007321676.1 Transcriptional activator protein czcR NC_003923.1003417.p0 Protein 5e-37 41
FAES_3074 YP_007321676.1 Transcriptional activator protein czcR NC_013450.8614146.p0 Protein 5e-37 41
FAES_3074 YP_007321676.1 Transcriptional activator protein czcR NC_002951.3238224.p0 Protein 5e-37 41
FAES_3074 YP_007321676.1 Transcriptional activator protein czcR NC_007793.3914065.p0 Protein 5e-37 41
FAES_3074 YP_007321676.1 Transcriptional activator protein czcR NC_002758.1121390.p0 Protein 5e-37 41
FAES_3074 YP_007321676.1 Transcriptional activator protein czcR NC_010079.5776364.p0 Protein 5e-37 41
FAES_3074 YP_007321676.1 Transcriptional activator protein czcR NC_002952.2859858.p0 Protein 5e-37 41
FAES_3074 YP_007321676.1 Transcriptional activator protein czcR AE015929.1.gene1106. Protein 2e-31 41
FAES_3074 YP_007321676.1 Transcriptional activator protein czcR NC_007622.3794948.p0 Protein 5e-37 41
FAES_3074 YP_007321676.1 Transcriptional activator protein czcR BAC0347 Protein 7e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FAES_3074 YP_007321676.1 Transcriptional activator protein czcR VFG0596 Protein 8e-37 42