Gene Information

Name : FAES_2892 (FAES_2892)
Accession : YP_007321494.1
Strain : Fibrella aestuarina BUZ 2
Genome accession: NC_020054
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3592552 - 3593244 bp
Length : 693 bp
Strand : -
Note : -

DNA sequence : 
ATGTACTTTGCCGATATGAAAGTTCTGATTGTGGAAGATGAGCCGAAGCTGGCGTCTTTCGTCAAAAAAGGGTTGGAAGA
GCAACGGTGTGAGGTTGATCTGGCCTATGACGGGCAGATTGGCCGGACTATGGCGCTGACCAACAGCTACGATGTGATCG
TCCTCGACGTTAACCTACCCAAAGTAAACGGCCTCGATCTGGCGCAAACCATTCGGCAGGAACAGGTCAAAACCCCCATC
CTGATGCTCACGGCGATGGGCTCAGTCGAAGACAAACTGTCGGGCTTTGAAGCCGGTGCCGACGACTACCTGGTGAAACC
GTTTGAGTTTCGCGAGCTGATGGCCCGCATCCGGGTCTTGCACAAGCGCAGTTCAGACAGCGGCAGCACAATCAACGTGT
TGCGCGTGGCCGATCTTGAACTAGACCTTAACGAAAAAGTGGCGCGGCGCGGCGGCAAGCGGATCGAACTGACCGCCAAA
GAATTTGGCCTGCTCGAATACCTGATGCGCAACCGGGGTCGGGTAGTGTCGCGAATCGACATTGCCGAAAAAGTGTGGGA
TATTCACTTCGATACCGGCACCAACGTGATCGACGTATACGTGAATTTCCTCCGTAAAAAGGTCGACAAAGAATTCCCGA
CCAAGCTCATCCATACGGTGATCGGGATGGGCTATATCATGAAGGAAGAGTGA

Protein sequence : 
MYFADMKVLIVEDEPKLASFVKKGLEEQRCEVDLAYDGQIGRTMALTNSYDVIVLDVNLPKVNGLDLAQTIRQEQVKTPI
LMLTAMGSVEDKLSGFEAGADDYLVKPFEFRELMARIRVLHKRSSDSGSTINVLRVADLELDLNEKVARRGGKRIELTAK
EFGLLEYLMRNRGRVVSRIDIAEKVWDIHFDTGTNVIDVYVNFLRKKVDKEFPTKLIHTVIGMGYIMKEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-40 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-39 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FAES_2892 YP_007321494.1 two component transcriptional regulator, winged helix family BAC0125 Protein 6e-48 52
FAES_2892 YP_007321494.1 two component transcriptional regulator, winged helix family BAC0111 Protein 3e-48 50
FAES_2892 YP_007321494.1 two component transcriptional regulator, winged helix family BAC0197 Protein 9e-45 49
FAES_2892 YP_007321494.1 two component transcriptional regulator, winged helix family BAC0083 Protein 3e-46 47
FAES_2892 YP_007321494.1 two component transcriptional regulator, winged helix family BAC0347 Protein 9e-43 47
FAES_2892 YP_007321494.1 two component transcriptional regulator, winged helix family BAC0638 Protein 2e-40 46
FAES_2892 YP_007321494.1 two component transcriptional regulator, winged helix family BAC0308 Protein 2e-43 44
FAES_2892 YP_007321494.1 two component transcriptional regulator, winged helix family NC_010079.5776364.p0 Protein 2e-37 42
FAES_2892 YP_007321494.1 two component transcriptional regulator, winged helix family NC_002952.2859858.p0 Protein 2e-37 42
FAES_2892 YP_007321494.1 two component transcriptional regulator, winged helix family NC_007622.3794948.p0 Protein 2e-37 42
FAES_2892 YP_007321494.1 two component transcriptional regulator, winged helix family NC_003923.1003417.p0 Protein 2e-37 42
FAES_2892 YP_007321494.1 two component transcriptional regulator, winged helix family NC_013450.8614146.p0 Protein 2e-37 42
FAES_2892 YP_007321494.1 two component transcriptional regulator, winged helix family NC_002951.3238224.p0 Protein 2e-37 42
FAES_2892 YP_007321494.1 two component transcriptional regulator, winged helix family NC_007793.3914065.p0 Protein 2e-37 42
FAES_2892 YP_007321494.1 two component transcriptional regulator, winged helix family NC_002758.1121390.p0 Protein 2e-37 42
FAES_2892 YP_007321494.1 two component transcriptional regulator, winged helix family AE015929.1.gene1106. Protein 1e-32 41
FAES_2892 YP_007321494.1 two component transcriptional regulator, winged helix family NC_002516.2.879194.p Protein 2e-25 41
FAES_2892 YP_007321494.1 two component transcriptional regulator, winged helix family Y16952.3.orf35.gene. Protein 4e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FAES_2892 YP_007321494.1 two component transcriptional regulator, winged helix family VFG0596 Protein 3e-40 44