Gene Information

Name : ompR (FAES_2224)
Accession : YP_007320826.1
Strain : Fibrella aestuarina BUZ 2
Genome accession: NC_020054
Putative virulence/resistance : Virulence
Product : Transcriptional regulatory protein cusR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2753843 - 2754526 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
ATGCGAATACTCCTGATCGACGACGAAGAGAAGCTAGCCCTGCACTTGCAAAAAGGGCTCAATCAGGCGGGTTATTCGGT
CGACGTGGCCCTATCCGGGTCAGCCGGACTAGAACAGGCGGCGCTGGGCACCCATGACCTGATTCTCCTCGACCTGATGT
TGCCCGGCACCACCGGTTTCGATTTGCTACGTAACCTGCGCGACTTCGGCATCGACACGCCGGTTATGATTCTGAGTGCG
CTCAACCAGTCGCAACACGTGGTGCGGGGGCTCGATCTGGGGGCCGTCGATTACCTGCGTAAACCTTTTGAACTCGACGA
ACTGCTGGCGCGTATCCGAACGGTGCAGCGGGGGCAGGCCGGTAGCCGTCTGCCTATCTGGCACGTGGCCGATCTGACCA
TGGACCTGACAACCCGCGAAGTGAGCCGTGCCGGAAAATCCATCGCGCTGACACCCCGCGAGTTTCAGTTGCTGGAGCAG
TTTATGCGCCAGCCGGGGCGGGTGCTGTCCAAGGCCCAACTGACCGAGAAAGTCTGGGATTCGGATTTCGACCGGGGTAG
TAACGTGGTGGAAGTGCACATGCATCAGCTTCGCAAAAAAATCGACAAAGGCTTCGCGACACCCCTGCTCGAAACGGTGG
TGGGCGTTGGCTACCGGCTGCGGGGTACGTTGACGTCTGCCTGA

Protein sequence : 
MRILLIDDEEKLALHLQKGLNQAGYSVDVALSGSAGLEQAALGTHDLILLDLMLPGTTGFDLLRNLRDFGIDTPVMILSA
LNQSQHVVRGLDLGAVDYLRKPFELDELLARIRTVQRGQAGSRLPIWHVADLTMDLTTREVSRAGKSIALTPREFQLLEQ
FMRQPGRVLSKAQLTEKVWDSDFDRGSNVVEVHMHQLRKKIDKGFATPLLETVVGVGYRLRGTLTSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-38 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-38 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ompR YP_007320826.1 Transcriptional regulatory protein cusR BAC0111 Protein 2e-46 47
ompR YP_007320826.1 Transcriptional regulatory protein cusR BAC0347 Protein 1e-41 46
ompR YP_007320826.1 Transcriptional regulatory protein cusR BAC0083 Protein 1e-44 45
ompR YP_007320826.1 Transcriptional regulatory protein cusR BAC0125 Protein 2e-42 44
ompR YP_007320826.1 Transcriptional regulatory protein cusR BAC0197 Protein 2e-41 44
ompR YP_007320826.1 Transcriptional regulatory protein cusR BAC0638 Protein 5e-38 44
ompR YP_007320826.1 Transcriptional regulatory protein cusR BAC0308 Protein 1e-41 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ompR YP_007320826.1 Transcriptional regulatory protein cusR VFG0596 Protein 4e-39 42
ompR YP_007320826.1 Transcriptional regulatory protein cusR VFG1390 Protein 3e-36 41
ompR YP_007320826.1 Transcriptional regulatory protein cusR VFG1386 Protein 3e-35 41