Gene Information

Name : FAES_1920 (FAES_1920)
Accession : YP_007320522.1
Strain : Fibrella aestuarina BUZ 2
Genome accession: NC_020054
Putative virulence/resistance : Virulence
Product : Chaperone protein clpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2364713 - 2367232 bp
Length : 2520 bp
Strand : -
Note : -

DNA sequence :
ATGACCTTATCTGCTTCCACCAAACGAGCCGTTCAGATTGCCCAGGCGCTGGCTAAAGAAACGCAGCATGCCGCCGTGTC
GCCGCCCCACCTGCTCAAAGGCCTGCTCCACAACGATGTGGGCCTGGCTAGCTGGGTAGCCGCGCTGGGTAAAGACGTTC
ATTTTTTGCGCGACTGGGCCGATTACCGCATCGAACTGCTGCCTCGTAATGGTAAAGTCGTTGAGAATCCGCCCAGTGAC
TTTCAGACGCAGGCCGCCTTTCAACTGGCCGATCTGATGGCCACCCAGTTCGAGACCATGGAAGTAGAGCCGGTGCATGT
ACTGGCGGCCCTGCTCAAGCCCAAAGTGGCCTTTTCGGAAGATCAGCTCAAGTCGCTGCCGATGGTCCAGAAAGAAGTGC
TCGACGCCATTCAGGATGAACGCATTGTGCTGAACGGACTGCAACCGGGGCAATCAACCGGTACCGCTCCGGCGGGCGGG
GCTGAGGGCGCACCCGACCAAACGGGTCAATCGGCCCTGAGCCGGTTCTGCGTGAACAAAACCGACGTAGCCCGCGAAGG
CAAGCTCGACCCGATTCTGGGCCGCGATCGCGAGCTGCGGCTGATGCTGGAAATTCTGCTGCGCCGCACCAAACCCAACG
TGATGTTGCTGGGCGAACCGGGCGTTGGCAAAACAGCGCTCGTGGAAGGCTTCGCGCAGGCCATTGTGGCGGGCACCGTT
CCCGAATCGCTCAAAGCGTCTGAGTTGTACGAACTTGATCTGGGCTCACTGGTGGCGGGGGCTTCCTACAAAGGGGAAGT
CGAAGACCGCATCAAAAACATTATCCGCGAGCTAAAGCAACTCGATAAACCGATTTTGTTTATCGACGAAATTCACATGC
TGCTCAACCCGCAGGGGTCGGTGGGCGCGGGCGTTTCCCAATTGCTCAAGCCCGAACTGGCGCGGGGCGAGCTGACCGTC
GTGGGCGCTACCACCCTCGACGAATACCGGCAATACGTGGAGAAAGACGAGGCCTTCAGCCGCCGGTTCGAGCAGCTGCC
CGTGCATGAACCCACGACCGTAGCGGCCGCCCGCATGGTGGGTACGTTGATTCCGCGCTACGAGGAGCACCACCAACTGA
CCACTGAGCCGGGGGTGGCTGAAGAAGCCGTTCGGCTGGCGCAACGGTACGTGAAAGACCGTCGCCTACCCGACGCCGCC
GTCGATCTGCTTGACCGCACGATGGCCGCCATCCGCACGATGGGCCAAACGGCCGAGTCAGACATCAAGGCGTTGCAGAC
TGAATTGGAGAGCGTGAGCGAGCGCGTAGCCGACCTCGAACCCGCCGAGCAACTGGCCGAATACCGCTGGCTGTTGCAGC
AAATGCAGAACAAGATCAGCCCCATTCTGCAACAACAACTCCCCGACGAAACACAGCCCGACACCATCGAACTGCCCGAC
GTACTGGCCGATTACCTCCGCGACCGGCTGGCCCAATTGCTCCCCCTGACGAGCATCCCACACGAGCAGGTACGCAAGCA
GGACGTTGCCGCCCTGGTAGCCGCCAAAACAGGTATTCCGATGGGTAAGCTACAAACCAACGAGCGCGACCGGCTGTTAC
GGATGGATGAGGTGTTGCGGCAGCGCGTGGTGGGGCAAGACCATGCCGTCGAAACGCTGGCTGCGGCCATTCTAGAAGCA
CGGGCGGGCCTCAGCACTGGCAAGCAACCCACGGGGGCCTTCTTCCTGCTGGGACCTACCGGCACCGGCAAAACCGAGTT
GGCCAAAGCCCTAGCCGATTTCCTGTTCAACGATGAGTCGTTCCTGATCCGGTTCGATATGTCGGAGTTTAAAGAAGAAC
ACTCCGCCGCGTTGCTGTACGGCGCCCCTCCCGGGTACGTTGGTTACGAGCAGGGTGGTTTGCTGGTGAACAAAATCCGC
GAGAAGCCTTACTCAGTCGTGCTGTTCGATGAAATCGAAAAGGCCCACCCGTCGGTGTTCGACATCTTCCTGCAAATTCT
GGACGAAGGCAAACTCCACGACCGACTCGGTAAAGAGGGCGACTTCAGCAACGCCGTCGTGCTGTTTACCTCCAACATCG
GCAGCGAATTTGTGGTGAAACAGTTTGGCGAAGGCACCATCCCCGCCGCTGCCGACCTAATGGAGATTATGAGCCGCCAC
TTCCGGCCTGAATTCCTGGCCCGCCTTACCGAGATTGTGCCGTTTGCCCCAATTTCGGAGGCCAACGTGGTGAAGATTTT
CGATATTCACCTCCGTGGTCTCACCGAGCCCCTGCGCAAACAGGGGATTACGCTGGCCATCAGCCCCGAGGCGCGGCAGC
AACTAGCCCTCAGTGGATTTACCCCGCGGTATGGGGCCCGGCCGCTCAAAGGCGTCATTCGCAGTCAGCTACGCCGCCCC
ATCTCGCGCATGATTATCAGCGGCGAGCTAACCCCCGGCTCGACGCTTCACATCAATCTGGACGATCAGTCGGCGCTCAC
CTGGACAGTCGAATCCGAAGCAGAAGTAGTTAACGATTAA

Protein sequence :
MTLSASTKRAVQIAQALAKETQHAAVSPPHLLKGLLHNDVGLASWVAALGKDVHFLRDWADYRIELLPRNGKVVENPPSD
FQTQAAFQLADLMATQFETMEVEPVHVLAALLKPKVAFSEDQLKSLPMVQKEVLDAIQDERIVLNGLQPGQSTGTAPAGG
AEGAPDQTGQSALSRFCVNKTDVAREGKLDPILGRDRELRLMLEILLRRTKPNVMLLGEPGVGKTALVEGFAQAIVAGTV
PESLKASELYELDLGSLVAGASYKGEVEDRIKNIIRELKQLDKPILFIDEIHMLLNPQGSVGAGVSQLLKPELARGELTV
VGATTLDEYRQYVEKDEAFSRRFEQLPVHEPTTVAAARMVGTLIPRYEEHHQLTTEPGVAEEAVRLAQRYVKDRRLPDAA
VDLLDRTMAAIRTMGQTAESDIKALQTELESVSERVADLEPAEQLAEYRWLLQQMQNKISPILQQQLPDETQPDTIELPD
VLADYLRDRLAQLLPLTSIPHEQVRKQDVAALVAAKTGIPMGKLQTNERDRLLRMDEVLRQRVVGQDHAVETLAAAILEA
RAGLSTGKQPTGAFFLLGPTGTGKTELAKALADFLFNDESFLIRFDMSEFKEEHSAALLYGAPPGYVGYEQGGLLVNKIR
EKPYSVVLFDEIEKAHPSVFDIFLQILDEGKLHDRLGKEGDFSNAVVLFTSNIGSEFVVKQFGEGTIPAAADLMEIMSRH
FRPEFLARLTEIVPFAPISEANVVKIFDIHLRGLTEPLRKQGITLAISPEARQQLALSGFTPRYGARPLKGVIRSQLRRP
ISRMIISGELTPGSTLHINLDDQSALTWTVESEAEVVND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 6e-118 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FAES_1920 YP_007320522.1 Chaperone protein clpB VFG0079 Protein 2e-115 42