Gene Information

Name : Cha6605_6161 (Cha6605_6161)
Accession : YP_007318366.1
Strain :
Genome accession: NC_020053
Putative virulence/resistance : Unknown
Product : site-specific recombinase, DNA invertase Pin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 194694 - 195287 bp
Length : 594 bp
Strand : +
Note : PFAM: Resolvase, N terminal domain; Helix-turn-helix domain of resolvase

DNA sequence :
GTGCTAATTGGCTATGCTCGTGTTTCAACTGACGACCAACTCCTCGATCTCCAGCAAGATGCACTGACGAAAGTTGGCTG
CGAGCGAATTTTTACAGATCGGGAGAGCGGTGCTAAAGCCACCCGCCCAGGACTGACATTAGCACTGGATATGTTACGCG
CAGACGATACACTTGTCGTTTGGCGACTAGATCGGTTGGGAAGATCGCTCAAGAACCTAATTGAGTTAACAGAACTGCTA
CGCGAACGATCGATCCAACTGCATAGCATCCAAGACGGAATCGACACATCCACCAGTGGCGGTCAATTAATGTTTCACCT
ATTCGGCGCACTGGCAGAATTCGAGCGAAATCTGATTCGCGAACGAACGAATGCTGGATTAACTGCCGCCAGAACCAGAG
GTAAGACAGGTGGCAGACCCAAGGCACTAGCACCGAATCAGAGAGCTTTAGTCGTCAGTCTGTACAAGGAGAAACAACAT
TCGCTCGATGAGATCTGTCAAATGATGGGTATTTCCAGACCTACTCTCTATAGTTATGTAGCCGAGGAACAAAACAGTGC
CCCGCAAACAAATCCCCGCCTCGGCTCTAGTTAG

Protein sequence :
MLIGYARVSTDDQLLDLQQDALTKVGCERIFTDRESGAKATRPGLTLALDMLRADDTLVVWRLDRLGRSLKNLIELTELL
RERSIQLHSIQDGIDTSTSGGQLMFHLFGALAEFERNLIRERTNAGLTAARTRGKTGGRPKALAPNQRALVVSLYKEKQH
SLDEICQMMGISRPTLYSYVAEEQNSAPQTNPRLGSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
res AGF35059.1 resolvase Not tested SGI1 Protein 9e-37 53
res AGK06929.1 resolvase Not tested SGI1 Protein 9e-37 53
res AGK06966.1 resolvase Not tested SGI1 Protein 9e-37 53
res AGK07012.1 resolvase Not tested SGI1 Protein 9e-37 53
res AGK07070.1 resolvase Not tested SGI1 Protein 9e-37 53
res AAK02044.1 resolvase Not tested SGI1 Protein 9e-37 53
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 9e-37 53
res AGF34985.1 resolvase Not tested SGI1 Protein 9e-37 53
res AGF35025.1 resolvase Not tested SGI1 Protein 9e-37 53
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 7e-38 51
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 1e-31 49
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 2e-38 47
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 2e-38 47
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 2e-34 47
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 3e-34 47
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 3e-34 47