Gene Information

Name : Cha6605_6086 (Cha6605_6086)
Accession : YP_007318297.1
Strain :
Genome accession: NC_020053
Putative virulence/resistance : Resistance
Product : copper/silver-translocating P-type ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 128342 - 130465 bp
Length : 2124 bp
Strand : -
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC

DNA sequence :
ATGAGACACGACCACAGTCAACACGAACAAAACCCACCCGCTCCATCTGGTGGGCACCAAGAACACGAACGACCACCTCA
AAGAAATCAGTCTAATCCCGACCCACATAGCAACCATAATGGTGATGGGCAACAGCCCAGTCAGCAACACGCTGGACATG
ATAAACACGCTGGACACAGCCCAGAGATTTTCAAACGACGCTTTTTTATCTGCTCGGTGTTAACGCTGCCCGTGCTGTAC
TTTGCGCCAATGTTGCAGATGTGGTTTAACTACAAAGCGATTCAGTTTTCGGGCGCGGAGTGGGTGATTCCGATTTTCTC
AACGATTATTTATTTTTATGGGGGGTGGGTTTTTCTAAAGGGAGCTTGGTTTGAACTCCAGAGTAAAATTGGCATGATGA
CTTTGGTTGCGCTAGCAATCACAGTGGCGTTTGTCTACAGTGTGGCAGTAACTTTCGGACTCAAAGGAGACTCCTTTTAC
TGGGAACTGGCAACCTTAGTCGATATCATGTTGCTCGGTCATTGGATGGAAATGGCTTCGGTGCTGGGAGCCAGCAATGC
GCTAGGCGAACTGGCGAAATTAGTGCCTTCTGTCGCTCACAAGCAGACGAATGGGCGGAGTGAAGATGTCCAAGTGAATA
CGTTAGTTGAGGGCGATCTAATTCTAATTCGTCCTGGCGAACAAGTCCCGATCGATGGTGAGATCGTCGAGGGTACTTCC
AATGTCAATGAATCTTTTCTAACTGGGGAGTCGCGCCCAGTGGTCAAAAAAGCCAAGGACGAAGCGGTCGCTGGAGCGGT
CAATGGCGAGGGTGCGCTGACAATTAAGGTCACTCGGACTGGAGATAACACTACCTTGAGCCAGATTATGCGGATGGTTA
AGGAAGCGCAGACATCTAAAAGTAAATTTCAATCGCTAGCCGATCGACTCGCCTATTGGTTAACTTTAATCGCGATCGGG
ATCGCTACACTCGCATTCGTGATTTGGCTATCGATTAAACCAGACGATCTATCATTTGCAGTCAGTCGGGCGGTGACTGT
ATTGGTGATTGCTTGTCCTCATGCGTTAGGGTTAGCAGTTCCCTTGGTGCTAGTCAATGCTACTGCCATGTCTGCTAAAA
ACGGGATTTTGGTGCGAAATCGCGAAGCCTTTGAACGAGCAAAAAGCATCAAAACAATCGCGATGGATAAAACGGGAACG
TTAACTACCGGACACTTTGGCGTACAAAGAACTTATACGGATAGTATCGATGAGGTAAAAGCTCTGGGCATTGCTGCTGC
CCTAGAATCTTTATCAGAACACCCGCTCGGACAATCGATCGTCGAAGAAGCCAGCCATCGCAAAATCGAGCTTGCTAAAG
CTAGTGACTTCCAAGCTGTTCCTGGTCAGGGCGTTGAAGGCGTAGTAGACGGTCAGCATTATCGGGTTGGCAGACCAGAA
TGGGTGCAGGAGTTGAAATTGCAGTTTCCACCAGCATTGCAACAGGGACTACAAGAACGTGAAGCTCGTGGTGAAAGTGC
GATCGTCCTGATGAACGACAAGCAAGTCCTCGCCCTGTTTGGGTTAGCCGACCAAGTGCGACCATCGGCACGAGAAGCAG
TTTTAAAACTAGAGAAGATGGGTGTGCAGGTGGTGATGATTACGGGCGATGCCGAAGCGGTTGCCAAGTCTGTTGCGGGG
GATTTGCAGATCGATCGCTATTATGCTCGTGTTTTACCACAAGATAAAGCGGCATTAATTCAGCGGCTTAAAGCTGAAAA
ACCGACTGCCTTTGTGGGCGATGGGATCAATGATGCGCCTGCTTTAACCGCGTCAGATTTAGGACTGGCGATCGGTGCTG
GAACTAATGTGGCTATCGAATCTGCCGATTTAATCTTGGTTAAAAGCGATCCGCTCGATGCCACCTACGCGCTCAAACTG
GCGAAAGCTACCTACGACAAAATGGTGCAGAACTTGCTGTGGGCAGCAGGATATAACGTCGTTGCTATCCCCTTAGCAGC
CGGAGTTGGTGTACCATTCGGCATTCTATTAACACCAGCAATAGCCGCAATATTAATGAGCGTTTCAACGGTGGTTGTCT
CATTTAATGCCATGTCTCTACGAACTATTCGGTTTAAGGATTAG

Protein sequence :
MRHDHSQHEQNPPAPSGGHQEHERPPQRNQSNPDPHSNHNGDGQQPSQQHAGHDKHAGHSPEIFKRRFFICSVLTLPVLY
FAPMLQMWFNYKAIQFSGAEWVIPIFSTIIYFYGGWVFLKGAWFELQSKIGMMTLVALAITVAFVYSVAVTFGLKGDSFY
WELATLVDIMLLGHWMEMASVLGASNALGELAKLVPSVAHKQTNGRSEDVQVNTLVEGDLILIRPGEQVPIDGEIVEGTS
NVNESFLTGESRPVVKKAKDEAVAGAVNGEGALTIKVTRTGDNTTLSQIMRMVKEAQTSKSKFQSLADRLAYWLTLIAIG
IATLAFVIWLSIKPDDLSFAVSRAVTVLVIACPHALGLAVPLVLVNATAMSAKNGILVRNREAFERAKSIKTIAMDKTGT
LTTGHFGVQRTYTDSIDEVKALGIAAALESLSEHPLGQSIVEEASHRKIELAKASDFQAVPGQGVEGVVDGQHYRVGRPE
WVQELKLQFPPALQQGLQEREARGESAIVLMNDKQVLALFGLADQVRPSAREAVLKLEKMGVQVVMITGDAEAVAKSVAG
DLQIDRYYARVLPQDKAALIQRLKAEKPTAFVGDGINDAPALTASDLGLAIGAGTNVAIESADLILVKSDPLDATYALKL
AKATYDKMVQNLLWAAGYNVVAIPLAAGVGVPFGILLTPAIAAILMSVSTVVVSFNAMSLRTIRFKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 3e-90 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cha6605_6086 YP_007318297.1 copper/silver-translocating P-type ATPase BAC0629 Protein 2e-150 49
Cha6605_6086 YP_007318297.1 copper/silver-translocating P-type ATPase BAC0101 Protein 8e-82 41