Gene Information

Name : Halha_0932 (Halha_0932)
Accession : YP_007314986.1
Strain : Halobacteroides halobius DSM 5150
Genome accession: NC_019978
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 916018 - 916707 bp
Length : 690 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :
ATGACTTTATTAAAGTTAGAAGGTATCAAGAAGATTTATCAACAAGGAGAGGTTGAAGTTCCAGCTTTGCGTGGAATAGA
CTTAACAGTAGAAGTAGGTGAGTTTACATCAATTGCTGGTCCTTCTGGATCAGGAAAATCAACTTTGCTTAATATAGTAG
GATGTCTTGATCAACCAAGTACGGGCCAAGTTTATTTAGAGGATACAGAGATAGATCAATTATCTGAAGATGAATTAGCT
ATGGTGAGAAGACATAATTTAGGGTTTATTTTTCAAGCTTTTAACTTGATTCCTGTATTAACAGTTTATGAAAATGTTGA
ATTTGCTCTTAATCTTGTTGGCCAGATGAAAAAATCAGAGATGAAAGAGCGAGTAATGGATATTTTAGATGCTGTAGGGT
TAAAAGATTTAGCAGATCGCAAGCCTAATGAATTATCAGGTGGTCAAAAACAGCGAGTCTCTATTGCTAGAGCTTTGGTT
AAACATCCTAAATTGGTATTAGCTGATGAGCCTACAGCAAATCTTGATTCCAAAACAAGTAAAGAAGTTTTAGAAGTAAT
GCTAGAAATGAATAAAAAATTAGAAACTACATTTATCTTTTCTACTCATGATCCGTTGATTATGGATTATGCCCAAAGAT
TAATTAAACTTAGAGATGGGCAAATCGTAGCAGATAAAAAGACAGTTTAA

Protein sequence :
MTLLKLEGIKKIYQQGEVEVPALRGIDLTVEVGEFTSIAGPSGSGKSTLLNIVGCLDQPSTGQVYLEDTEIDQLSEDELA
MVRRHNLGFIFQAFNLIPVLTVYENVEFALNLVGQMKKSEMKERVMDILDAVGLKDLADRKPNELSGGQKQRVSIARALV
KHPKLVLADEPTANLDSKTSKEVLEVMLEMNKKLETTFIFSTHDPLIMDYAQRLIKLRDGQIVADKKTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-34 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halha_0932 YP_007314986.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 3e-40 47
Halha_0932 YP_007314986.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 2e-45 46
Halha_0932 YP_007314986.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 2e-42 44
Halha_0932 YP_007314986.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 2e-41 44