Gene Information

Name : Halha_0399 (Halha_0399)
Accession : YP_007314487.1
Strain : Halobacteroides halobius DSM 5150
Genome accession: NC_019978
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 408941 - 410695 bp
Length : 1755 bp
Strand : +
Note : PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase

DNA sequence :
ATGAGAAAGACTAAAATTGTTTGTACTATTGGCCCTGCTAGTGATGATAAGGAAACATTATCTGAATTGATTGATGCAGG
TATGAATGTAGCACGACTTAACTTTTCCCATGGTGATTTTGAGGAGCATGGAGCAAAGATAGACAAGATTAGAGAATTAT
CTGCTGAAAAGGAAAAGCCTGTAGCTTTATTATTAGATACTAAGGGGCCAGAAATTAGAACTGGTGACTTAGAGAATGAT
GAAGATGTAGTTTTAGAAGCTGGGCAAGATTTTACTTTAACTACAGAAGATATTGTAGGAAATAATGAAAAAGTATCTGT
TTCCTATAAGAATTTACCGGAAGATATGTCTGTTGGTAAGACAATTTTAATTGATGATGGATTAATTGGTTTAGAAGTAA
AGGAAGTCAATAAAACAGATGTTATTTGTACGGTAGTTAATGGTGGAGAATTAGGTTCTACAAAAGGTGTTAACTTACCT
GGTGTGTCTGTACAATTACCAGCTATTACTGATAAGGATAAAAATGATATTAAGTTTGGTATAGAACAAGGTGTAGACTT
TATTGCTGCTTCTTTTGTTCGTAAAGCAGCTGATGTTTTAGCTATTAGAGAAATTTTAGAAGAGCATAATGCTGATATAC
ATATAATTGCTAAAATTGAGAATCAAGAGGGAGTAGAAAATGTTGATGAAATCTTAGAAGTAGCTGACGGATTAATGGTA
GCTCGTGGTGATTTAGGTGTAGAGATTCCACCAGAGAAGGTACCAGCTGCTCAAAAGATGATGATAAATAAGTGTAATAG
AGCAGGTAAACCAGTTATTACAGCTACTCAAATGTTAGAGTCAATGATTCACAATCCACGGCCTACAAGAGCAGAAGCTA
GTGATGTAGCTAATGCTATTTATGATGGTACTGATGCAACAATGTTATCTGGTGAGACTGCAAAAGGTGATTATCCACAA
GAGTCAGTTAAAACAATGGCTAACATTGCAACAGAGACTGAAAAATCATTAAAGTATCGACAACTATTAGATAGAGAAGC
ACTAAATCCAGCTAGAACAATTACTGATTCAATTAGTTATGATACATGTAAGACTGCTTATGAATTAGGAGCTTCTGCAA
TTATTACTTCTACTCGTTCTGGATATACAGCTAGAATGGTTTCTAAGCATAGACCATATGCTCCTGTAGTAGCTGTTACT
CCTAACAAAAGAGTCTTTAATAAATTAATCTTATCTTGGGGGGTTAAGCCTGTATTAGCAGATATTACTGAATCTACAGA
TGAGATGATTGATGAATCAATAGCTGCTGCTAGAAAAGATGGCTATGTAGAACAAGGTGATTTAGTAGTTATGACTGCTG
GTGCTCCAGCTGGTGTTCCAGGAACTACTAATTTATTAAGAGTAGAAATAGTTGGAGAAGTTGCTTTACGTGGTGTAGGA
GTTGGTAATAAATCCGCTAGTGGGAGAGTTTCTATAGCTTACAATGCCAATGATGCAAAAGAAAAGGTTAAACAAGGAGA
TATTTTAGTGGTACCAGAAACAAATGATGATTACTTACCTGCTTTAGAGAAAGCAGCAGGGGTAATTACAGAAAATCCTG
GTTTAACTTCTTATACTGCTATTAAAGGATTAAAACTTGATATTCCTGTAATAGTAGGAGTTTCTAATGCCACTGATAAT
TTAGAAGATGATGAAGTTGTTACAATAGATAGTATTAGAGGATTAATCTATAAAGGTGAAGCTAAGATTTTATAA

Protein sequence :
MRKTKIVCTIGPASDDKETLSELIDAGMNVARLNFSHGDFEEHGAKIDKIRELSAEKEKPVALLLDTKGPEIRTGDLEND
EDVVLEAGQDFTLTTEDIVGNNEKVSVSYKNLPEDMSVGKTILIDDGLIGLEVKEVNKTDVICTVVNGGELGSTKGVNLP
GVSVQLPAITDKDKNDIKFGIEQGVDFIAASFVRKAADVLAIREILEEHNADIHIIAKIENQEGVENVDEILEVADGLMV
ARGDLGVEIPPEKVPAAQKMMINKCNRAGKPVITATQMLESMIHNPRPTRAEASDVANAIYDGTDATMLSGETAKGDYPQ
ESVKTMANIATETEKSLKYRQLLDREALNPARTITDSISYDTCKTAYELGASAIITSTRSGYTARMVSKHRPYAPVVAVT
PNKRVFNKLILSWGVKPVLADITESTDEMIDESIAAARKDGYVEQGDLVVMTAGAPAGVPGTTNLLRVEIVGEVALRGVG
VGNKSASGRVSIAYNANDAKEKVKQGDILVVPETNDDYLPALEKAAGVITENPGLTSYTAIKGLKLDIPVIVGVSNATDN
LEDDEVVTIDSIRGLIYKGEAKIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 7e-112 55
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 4e-112 55
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-112 55
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-112 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halha_0399 YP_007314487.1 pyruvate kinase VFG0479 Protein 1e-112 55