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Name : Halha_0027 (Halha_0027) Accession : YP_007314148.1 Strain : Halobacteroides halobius DSM 5150 Genome accession: NC_019978 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 25575 - 26858 bp Length : 1284 bp Strand : + Note : PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase DNA sequence : ATGTTAGATTTAGGATTTGTTAGAGAAAATATTGATTTAGTTAAGGAAGTATTAGATCAGCGAGGAACTGAAGCACCAAT TAATGAATTTACTGAAGTTGATAATAAAAGAAGAGAATTAATTCAAGAGGTAGAAAAATTACAACAAAAAAGAAATAAGG AATCCACTAAAATTGGTCAATTAAAAAGGGAAGGTAAAGATAAGGAAGCAGAAGAGATAATTCAAAAGATGGGCCAAGTT GCTGATGAAATTAAAGAATTAGAAGGGCAAGTAAAAGAGTATAATCAGCGATTAGATGAAATTATGCTTAGAGTTCCTAA TATTCCCCATGAATCTGTTCCTGTTGGAAAAGATGAATCAGATAATGTTTGTAACCGTAAGTGGGGTAAACCAACAGAGT TTGATTTTGAAGCTCAAGCTCATTGGGATTTAGGAACAGCACTTGGTATTTTAGATTTTGAACGAGGGGCCAAGGTTTCT GGTGCTAGATTTACATTTTTAAAAGGAGCTGCAGCTAAGTTAGAGCGAGCTTTAATCTCTTTTATGCTTGACATTCATAC TCAAGAACATGATTATAATGAAGTTTTTCCACCATTTATGGTGCATAAAGATAGTATGTTAGGCACAGGACAGTTACCTA AATTTAAAGAAGATGCCTTTAAGGTTGAAGGGACAGATTATTATTTAATCCCTACTGCTGAAGTACCTGTTACAAATATG TATCGTGGTCAGATATTAAATAAAGAGGAATTACCAATTTATCATGTAGCTCATAGTGCTTGTTTTAGAGCAGAAGCAGG AGCTCATGGTCGAGATACACGAGGGATTATTAGACAACATCAGTTTAATAAAGTTGAGATGGTTAAATTTGTTGAACCAG AAGATTCCTATGATGAGTTAGAAAAATTAGTTAAAAATGCAGAAACTATTCTTCAGAGATTAGAATTGCCATATAGAGTA ATGGATATGTGTACTGGTGATTTAGGATTTACTGCTGCTAAAAAGTATGACCTTGAGGTTTGGATGCCAAGTTATGATAC TTATCGTGAAATCTCTTCTTGTAGTAACTTTGAAGACTTTCAAGCAAGAAGAGCCGGAATTAAGTATCGACCAAAAGCAG GGGCCAATACTCGCTATGTTCATACTTTAAATGGATCTGGTTTAGCAATAGGTAGAACAGTAGCAGCACTTATGGAAAAT TATCAAAATGCAGATGGTAGTATTACTATTCCTGAAGCTTTACAGCCTTATATGGGTGGACAAAAAAGAATTAATAAAGA ATAA Protein sequence : MLDLGFVRENIDLVKEVLDQRGTEAPINEFTEVDNKRRELIQEVEKLQQKRNKESTKIGQLKREGKDKEAEEIIQKMGQV ADEIKELEGQVKEYNQRLDEIMLRVPNIPHESVPVGKDESDNVCNRKWGKPTEFDFEAQAHWDLGTALGILDFERGAKVS GARFTFLKGAAAKLERALISFMLDIHTQEHDYNEVFPPFMVHKDSMLGTGQLPKFKEDAFKVEGTDYYLIPTAEVPVTNM YRGQILNKEELPIYHVAHSACFRAEAGAHGRDTRGIIRQHQFNKVEMVKFVEPEDSYDELEKLVKNAETILQRLELPYRV MDMCTGDLGFTAAKKYDLEVWMPSYDTYREISSCSNFEDFQARRAGIKYRPKAGANTRYVHTLNGSGLAIGRTVAALMEN YQNADGSITIPEALQPYMGGQKRINKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-123 | 60 |
