Gene Information

Name : Halha_2608 (Halha_2608)
Accession : YP_007316574.1
Strain : Halobacteroides halobius DSM 5150
Genome accession: NC_019978
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2626416 - 2626814 bp
Length : 399 bp
Strand : -
Note : PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)

DNA sequence :
TTGCTAAATAAAGTTATATTAATTGGTAGGTTAACTGATGACCCTGAATTGCGATATACTCCAAGTGGAACGGCTGTATG
TAATTTTACATTAGCTGTTGAACGTAACTTTAGAAATCAAAATGGAGAATATGACACCGACTTTATTGATATTGTTGTTT
GGAGAAAGCAGGCAGAAAACTGTGCTAACTACTTATCTAAAGGTCGTTTAGCGGCGGCAGAAGGTAGATTGCAGATTAGG
TCTTATGAGAATAATGAAGGGCAACGGCGTAGAGTAACTGAAATTGTTGCAAATAGTGTGCAGTTTTTAGAGTATTCAAA
TAACAACAACAATAATAATAATCAAAACAACAATCAAGGACAATCTAGTGCGGAAGAAGATATAGATGTTCCGTTTTAG

Protein sequence :
MLNKVILIGRLTDDPELRYTPSGTAVCNFTLAVERNFRNQNGEYDTDFIDIVVWRKQAENCANYLSKGRLAAAEGRLQIR
SYENNEGQRRRVTEIVANSVQFLEYSNNNNNNNNQNNNQGQSSAEEDIDVPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 2e-29 66
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 2e-28 66
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 2e-29 65
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 3e-26 64
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 3e-29 64
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 1e-24 59
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 4e-16 46
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 6e-16 46