Gene Information

Name : Halha_2603 (Halha_2603)
Accession : YP_007316569.1
Strain : Halobacteroides halobius DSM 5150
Genome accession: NC_019978
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2622947 - 2624278 bp
Length : 1332 bp
Strand : -
Note : PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase

DNA sequence :
ATGAATGAGGTGGAAAAAGTCCCTCCTCATAGTTTAGATGCAGAAAAATCTACTTTAGGATCAATGTTATTAGATCGTGA
TGCTATTGGTAAAGGGATTGAGATATTAACCTCTGATGATTTTTATTGGCAATCACACTCTATTATCTTTGGAGCAATTA
GTCAATTATTTGAGGCTGGTGAACCAGTTGATTTAGTAACTATCAATCAACAGTTAAGAGAAGATAAAAAATTAGAAGAA
GTAGGTGGAGCATCTTATATAACTTCGTTGGTTAATAGTGTTCCTACAGCAGCTAATATAGAGCATTATGCTAAGATTGT
AGGAGAAAAAGCGATGTTAAGGCGATTAATTAAGGTAGCAGGAGAAATTTCTCAACTTGGTTATAGTGAAGAAGAAGATG
TAGATACCTTATTAGATAAAGCTGAAAGTCGTATTTTTGAAATTTCTCAAACAAGAAGGACAGATGGTTTTGCTAATGTT
AAGGATGTATTAATGGATACTTTTGATCGCTTAGAACAGTTACATGAGCACAATAGTGATGTAACAGGAGTCCCAACTGG
TTTTAGTGATTTAGATAAAATGACTTCTGGTTTTCAAGAGTCTGATTTAATAATTATTGCAGCAAGGCCTAGTATGGGAA
AGACTGCTTTAGCTTTAAATATAGCACAATATGTAGCTGTGGAAGAGGATATTCCAGTAGCTATCTTTTCACTAGAGATG
TCAAAGGCACAGTTAGTACAAAGAATGTTATGTACTGAGGCACAGGTTGATAACCATAGACTGCGAACTGGTAAATTAAG
GGATAATGATTGGCGTAGATTATCCCAAGCAGCAGGTCGTTTAGGAGAATCGAATATATTTATTGATGATACTCCAGGAA
TTAGTGCTATGGAGATGAGGGCCAAGGCTAGAAGAATCAAAACTGAACACGGATTAGGTATGATTTTAATAGATTATTTA
CAATTGATGCAAGGAAGTGGAAGTTCTGAGAGTCGTCAATTAGAAGTATCTAAGATTTCTCGTTCTTTAAAAGGTTTAGC
TAGAGAATTGGATGTACCAGTAGTTTCATTATCTCAGTTAAGTAGAGCAGTAGAACAAAGAAATGATAAACGACCTCAAC
TTAGTGATTTAAGGTCTAGTGGTTCTATTGAGCAGGATGCTGATGTAGTAGCATTTATTTATCGTGATGAATATTATAAT
CCTGACACGGAAAAACAAGGGATTACTGAAATTATCGTAGGAAAACAACGGAATGGTCCTGTAGGTACAGTAGAACTAGC
TTTTCAAAAAGAATATACAAGATTTGTTGATTTATCTAAGAGAGAAGGGTAG

Protein sequence :
MNEVEKVPPHSLDAEKSTLGSMLLDRDAIGKGIEILTSDDFYWQSHSIIFGAISQLFEAGEPVDLVTINQQLREDKKLEE
VGGASYITSLVNSVPTAANIEHYAKIVGEKAMLRRLIKVAGEISQLGYSEEEDVDTLLDKAESRIFEISQTRRTDGFANV
KDVLMDTFDRLEQLHEHNSDVTGVPTGFSDLDKMTSGFQESDLIIIAARPSMGKTALALNIAQYVAVEEDIPVAIFSLEM
SKAQLVQRMLCTEAQVDNHRLRTGKLRDNDWRRLSQAAGRLGESNIFIDDTPGISAMEMRAKARRIKTEHGLGMILIDYL
QLMQGSGSSESRQLEVSKISRSLKGLARELDVPVVSLSQLSRAVEQRNDKRPQLSDLRSSGSIEQDADVVAFIYRDEYYN
PDTEKQGITEIIVGKQRNGPVGTVELAFQKEYTRFVDLSKREG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 7e-79 45
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 7e-79 45
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 7e-85 43
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 3e-75 42
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 4e-82 42
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 9e-83 42
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-79 42
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 5e-65 42
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 3e-71 41