Gene Information

Name : Halha_2419 (Halha_2419)
Accession : YP_007316386.1
Strain : Halobacteroides halobius DSM 5150
Genome accession: NC_019978
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2428577 - 2429302 bp
Length : 726 bp
Strand : -
Note : PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase

DNA sequence :
ATGAAAGTAATAGCTATTATTCCAGCACGTTATAGTTCTACTCGGCTACCAGGGAAGCCAATTAAAAAGATTAAGGGTAA
AGCAATGATTCAACATGTTTATGAAAGAACTGCTCAAGCTCAAAATCTAGATCAGGTGATTGTAGCTACCGATGACCAAA
GAATTTATCAAGTAGTTAAAGACTTTGGGGGTAAGGTAGAAATGACATCTTCTCAGCACCAGACAGGAACTGATCGTTTG
GCTGAAGTAGCCAATGATTTAGAGGCAGATATTATTGTTAATGTCCAAGGAGATGAACCATTAATAGCTCCGGAGATGAT
TGATCAAGCAGTGAAACCTTTATTAGAGGATAATAATTTGCAGATGGGAACTCTAAAACATCCCATCATTAGCGCAGAAG
AATTAGAAAATCCCAATCTGGTTAAAGTAGTAACTGATAAGAATGATTTTGCTCTTTATTTTTCTCGCGCACCTATTCCC
TATCCACACCAGGAAAATGATATTACTTATTATAAACATATTGGATTATACGTTTATCGTAGAGAATTTTTATTAAATTA
TGCTGATTTACCTGCTACTCCTTTAGAGCAGCAGGAATCTTTAGAGCAACTAAGAGCTTTAGAGAATGGTTATAAGATTA
AGGTTGTTAAGACAGAGCATCAATCTATTGGGGTTGATACTAAAGATGATTTAGAGAAGGTAAGGAAGATAGTAAATCAA
TCATGA

Protein sequence :
MKVIAIIPARYSSTRLPGKPIKKIKGKAMIQHVYERTAQAQNLDQVIVATDDQRIYQVVKDFGGKVEMTSSQHQTGTDRL
AEVANDLEADIIVNVQGDEPLIAPEMIDQAVKPLLEDNNLQMGTLKHPIISAEELENPNLVKVVTDKNDFALYFSRAPIP
YPHQENDITYYKHIGLYVYRREFLLNYADLPATPLEQQESLEQLRALENGYKIKVVKTEHQSIGVDTKDDLEKVRKIVNQ
S

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 6e-51 51
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 9e-51 51
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 5e-51 51