Gene Information

Name : Halha_2417 (Halha_2417)
Accession : YP_007316384.1
Strain : Halobacteroides halobius DSM 5150
Genome accession: NC_019978
Putative virulence/resistance : Virulence
Product : KpsF/GutQ family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2426750 - 2427727 bp
Length : 978 bp
Strand : -
Note : PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein

DNA sequence :
ATGTCTCAAAAAGAGATAGCAATAAAAGAACAAGCTCAAGAAGTACTAAAGATTGAAGCAGAAGCTATAAAAGGTGTATC
TGAAGCAATAGATCAGGAATTTGTAGCTGTGGTACAAGAAATTTTAGATTGTACGGGGCGAGTGATTATGACGGGGATGG
GTAAGTCAGGTTTTATTGCTAAGAAATTAGCAGCTACTTTATCTAGTACCGGAACTCCTGCTTTTTTTCTTCATCCAGCT
GAGGCAATCCATGGTGATTTGGGGATGGTAACTGAAAAGGATATAATAATTGCTATCTCTAATAGTGGAGAAACAGAAGA
AATAGTCAATATCTTACCTGTAATTAAACGGATCGGAGCCCAAATTGCAGCTATTACTGGTAATATTGAATCGACTTTGG
CCCAAACTGGAGATTATACTTTAGAAGCTGCTATTGAAGAAGAAGCTTGTCCGTTAAATTTAGCACCAACAGCTAGTACT
ACAGCAGCCTTAGCTTTAGGTGATGCCTTAGCAATGGTATTATTGGCTATTAGAGACTTTAAACCAGAAGATTTTGCACT
TTATCATCCAGGAGGTAGTTTAGGTAGGCAACTATTATTGACAGTTGATGACGTATTACATGTTAGAGAACGTAATCCAA
TAGTTAAGCAGGATTCTACTTTAAAAGAGACTTTATTTGTTATGACTTCTACTAGGATGGGCGCAGCTAATATTGTTGAT
GCTGAAGGTGAATTAGCAGGGATTATTACTGATGGTGATATTAGGCGATTGTTAGAAGAAGATCCTCATTTAATGCATAA
AGAAGCCCAAGAGATAATGTCTGTAGGGCCTACAACTATTACACCGGATAAATTAGCAGCAGAAGCACTAAAAATTATGC
AAGATAAAGAGATTAATGATTTGCCAGTAGTGGACCAAGAAGGTAAACCTTTAGGATTAGTTAATTTTCAAGACTTACTT
AAGGCTGGGGTTATTTAG

Protein sequence :
MSQKEIAIKEQAQEVLKIEAEAIKGVSEAIDQEFVAVVQEILDCTGRVIMTGMGKSGFIAKKLAATLSSTGTPAFFLHPA
EAIHGDLGMVTEKDIIIAISNSGETEEIVNILPVIKRIGAQIAAITGNIESTLAQTGDYTLEAAIEEEACPLNLAPTAST
TAALALGDALAMVLLAIRDFKPEDFALYHPGGSLGRQLLLTVDDVLHVRERNPIVKQDSTLKETLFVMTSTRMGAANIVD
AEGELAGIITDGDIRRLLEEDPHLMHKEAQEIMSVGPTTITPDKLAAEALKIMQDKEINDLPVVDQEGKPLGLVNFQDLL
KAGVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 4e-51 47
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 6e-51 47
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 5e-51 46