Gene Information

Name : Halha_2331 (Halha_2331)
Accession : YP_007316298.1
Strain : Halobacteroides halobius DSM 5150
Genome accession: NC_019978
Putative virulence/resistance : Virulence
Product : ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2329555 - 2330349 bp
Length : 795 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGGATAATTTAGAAACAAAATCATTGGTATTATCATATGGCGAGGAGCCTATTATTGATGATTTAAATATTAAGATTCC
CAAAGGGAAAATTACTGTTTTTATAGGAAGTAATGGGTGTGGAAAATCCACATTACTACGCTCTTTAGCTAGACTGTTAA
AGCCTAAGAAAGGAGCTGTTTTACTAGATGGCGAAAAGATAAATAATCTATCTACAAAAGAAGTTGCAAAACGTCTAGCC
ATTCTTCCTCAAAGTCCTTTGACCCCAGAAGGTTTAACAGTCTTCGAACTGGTTAAGCAAGGGCGCTATCCTTACCAAAA
TTGGTTACAACAGTGGTCTCAAGAAGATGAAAAGATGGTTAATAAAGCACTTGAAGCTACAAAGATGACTTCTCTTGCTG
ATAGATCTGTAGATTCGCTCTCAGGGGGACAAAGGCAAAGAGGTTGGATAGCAATGACCCTTGCCCAAGCAACTGATACC
ATTTTGTTAGATGAACCAACTACTTATTTAGATTTGGCCCACCAAGTAGAGATTCTAGATTTATTGCATGATTTAAATAA
AGAGGAAGATCGTACTATTATTATGGTACTACATGATCTAAATCTAGCTTGTCGTTATGCAGATCATATTATTGCAATCA
AAGATAAAAATGTTTATACACAAGGTAAACCAAAAGAAGTTGTAAATGCACAGATGGTGCGTGAAGTATTTGGCATGGAA
TCTGAAATTGTCTCCGATCCCATATTTAAAACCCCACTTTGCATCCCCATTGGTAAAGGAAAAAAAGTTCTGTAA

Protein sequence : 
MDNLETKSLVLSYGEEPIIDDLNIKIPKGKITVFIGSNGCGKSTLLRSLARLLKPKKGAVLLDGEKINNLSTKEVAKRLA
ILPQSPLTPEGLTVFELVKQGRYPYQNWLQQWSQEDEKMVNKALEATKMTSLADRSVDSLSGGQRQRGWIAMTLAQATDT
ILLDEPTTYLDLAHQVEILDLLHDLNKEEDRTIIMVLHDLNLACRYADHIIAIKDKNVYTQGKPKEVVNAQMVREVFGME
SEIVSDPIFKTPLCIPIGKGKKVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-65 50
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-62 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-62 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-61 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-61 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-58 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-61 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-61 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-53 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-50 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-50 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-50 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-50 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halha_2331 YP_007316298.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component BAC0164 Protein 1e-58 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halha_2331 YP_007316298.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component VFG0925 Protein 8e-67 51
Halha_2331 YP_007316298.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component VFG1042 Protein 1e-58 47