Gene Information

Name : Halha_2217 (Halha_2217)
Accession : YP_007316186.1
Strain : Halobacteroides halobius DSM 5150
Genome accession: NC_019978
Putative virulence/resistance : Unknown
Product : alpha,alpha-phosphotrehalase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2219107 - 2220792 bp
Length : 1686 bp
Strand : -
Note : PFAM: Alpha amylase, catalytic domain; TIGRFAM: alpha,alpha-phosphotrehalase

DNA sequence :
ATGGAAAAATTAAGTGATAAATGGTGGAGAGATTCCGTTGTCTATCAAATTTACCCTAAAAGCTTTAATGATACTACAGG
AAATGGTGAAGGTGACTTACAAGGAATTATAGAGAAACTTGATTATTTAAATAAATTAGGGGTTGATGTAATCTGGTTAA
CTCCAATTTACGAATCACCTCAGAATGATAACGGATATGATATAAGTGATTATTATAGTATTTACAAAGAGTATGGAACA
ATGGATGATTTTGAGAGATTATTAGAAGAGGCTCATCAACGTGGGATTAAAGTTATTATGGATATAGTTATTAATCATAC
TTCTACTGAGCACCAATGGTTTAAGGAAGCAAGAAAGTCTAAAGATAATCAATATAGAGATTTTTATATTTGGAAGGATG
GTACTGAAGGCGAAGTACCAAATAACTGGGAATCAAAATTTGGTGGTTCTGCTTGGCAGTATGATGAGCAGACGGGGCAA
TATTATTTACACTTATTTGATGTAACACAGGCTGATTTAAATTGGGAGAATGAAGAAGTACGAGATAAATTATATGAGAT
GATGAACTTTTGGTTAGAGGAAAAAGGAGTAGATGGATTTAGGTTAGATGTAATTAATTTAGTCTCTAAAAGACAAGATT
TCCCAGATGATTATCAAGGTGATGGCAGGAGATTCTATACTGACGGGCCAAGGGTTCATGAGTTTATGCAGGAAATGAAT
CAAGAGGTATTCTCCAATTATGATATGATGACAGTAGGAGAGATGTCTTCAACTAATATTGCAGATTGTGTTAAATATAC
TAATCCTGATAGAAATGAATTAGATATGGTCTTTAGCTTCTATCATCTAAAAGTTGATTATCCAAATGGGAAGAAATGGA
GTAATGAAGACTTTGATTTTATTCAATTAAAAGAAATTTTATCCAACTGGCAGGTAGGAATGAATCAAGGTGGGGGCTGG
AATGCTCTATTTTGGTGTAACCATGACCAACCACGAGTTGTAACTAGATTTGGTGATGATCAAGAGTATCATAAAGAATC
AGCCAAAATGCTTGCTACAACAATGCACATGATGCAAGGTACTCCTTATATTTATCAAGGAGAGGAAATTGGTATGACAG
ATCCTAAATTTGATAGTATTGATGACTATCGTGATGTTGAGTCGCTAAATGCTTATCAAATTATGAAAGAAGAAGGTAAG
ACAGAAGAAGAAATTATGGCTGCTATTAGGGCCAAGTCCAGAGACAACTCCCGAACTCCAATGCAATGGGATGCTAGTGA
ACATGCTGGTTTTACTAGTGGAACACCTTGGATTAAGGAAGCATCAAATTATAAAGAAATTAATGCCGAGCAGGCATTAA
AAGAGCAAGATTCTATCTTTTATCATTACCAAGAATTAATTAAATTAAGAAAAGAACTAGATATTATTGTCTATGGTGAT
TACCAATTAATTTTAGATGAGCACCAAGATATTTTTGCTTATCTAAGAAGTTATGAAGACGAAAAATTATTAGTGATTAA
TAACTTCTATGGTGAAGAAACTATTTTTGAATTACCAGCTAAATTACAGGATTTAGTTGATTATCAAAGTGAAGTTTTAA
TTTCTAATTATAGTGATTATCCAAAAGATTTTGCAAGGATTAAACTAAGACCATATGAGTCAATTGTTTATCATCTTGAA
AAATAA

Protein sequence :
MEKLSDKWWRDSVVYQIYPKSFNDTTGNGEGDLQGIIEKLDYLNKLGVDVIWLTPIYESPQNDNGYDISDYYSIYKEYGT
MDDFERLLEEAHQRGIKVIMDIVINHTSTEHQWFKEARKSKDNQYRDFYIWKDGTEGEVPNNWESKFGGSAWQYDEQTGQ
YYLHLFDVTQADLNWENEEVRDKLYEMMNFWLEEKGVDGFRLDVINLVSKRQDFPDDYQGDGRRFYTDGPRVHEFMQEMN
QEVFSNYDMMTVGEMSSTNIADCVKYTNPDRNELDMVFSFYHLKVDYPNGKKWSNEDFDFIQLKEILSNWQVGMNQGGGW
NALFWCNHDQPRVVTRFGDDQEYHKESAKMLATTMHMMQGTPYIYQGEEIGMTDPKFDSIDDYRDVESLNAYQIMKEEGK
TEEEIMAAIRAKSRDNSRTPMQWDASEHAGFTSGTPWIKEASNYKEINAEQALKEQDSIFYHYQELIKLRKELDIIVYGD
YQLILDEHQDIFAYLRSYEDEKLLVINNFYGEETIFELPAKLQDLVDYQSEVLISNYSDYPKDFARIKLRPYESIVYHLE
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 5e-149 53