Gene Information

Name : Halha_2103 (Halha_2103)
Accession : YP_007316080.1
Strain : Halobacteroides halobius DSM 5150
Genome accession: NC_019978
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2101947 - 2102399 bp
Length : 453 bp
Strand : -
Note : PFAM: SmpB protein; TIGRFAM: SsrA-binding protein

DNA sequence :
ATGAAAACAATTGCAAAGAATCGTAAAGCAAGGCATGAGTACCATATTGAAGAGACTTATGAAGCTGGAATTGTACTCCA
GGGGACAGAAGTGAAGTCTATTCGTGCTGGAAAAGTAAACCTTAAAGATAGCTTTGCTTTGGTTAGAGATGAAGAAGCCT
TCTTGCATAATATGCATATTGCTCCATACAAAGAAGGTAATCGTTATAATCATGAACCAGAGAGAAAAAGGAAGCTATTG
CTTCATAAACACCAAATTAAATCATTGATAGGAAAGACTAAACAACAAGGATATACTTTAATTCCTTTAAAGCTTTATTT
TAAACATGATCTAGTTAAAGTTGAATTAGCTTTAGCTGAGGGTAAGAATCTTCATGATAAGCGCGAAGATATTAAACGTA
AGACTGCACAACGTGAGATTCAGCGGGCATTGAAAGACCGGCAAAGATATTAG

Protein sequence :
MKTIAKNRKARHEYHIEETYEAGIVLQGTEVKSIRAGKVNLKDSFALVRDEEAFLHNMHIAPYKEGNRYNHEPERKRKLL
LHKHQIKSLIGKTKQQGYTLIPLKLYFKHDLVKVELALAEGKNLHDKREDIKRKTAQREIQRALKDRQRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 1e-38 59
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-34 55
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 7e-29 46