Gene Information

Name : Halha_1742 (Halha_1742)
Accession : YP_007315772.1
Strain : Halobacteroides halobius DSM 5150
Genome accession: NC_019978
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1775207 - 1775896 bp
Length : 690 bp
Strand : -
Note : PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase

DNA sequence :
ATGTTAGAAAATTTAAAAGAGGAAGTACTACAAGCTAACTTGGAGTTGCCTGAACGTGGATTAGTAACTTATACGTGGGG
TAATGTAAGTGGAATTGATAAAAAAAAAGGATTGGTGGTTATTAAACCAAGTGGTGTACCATATGAAGAAATGACTGTAG
AGGATATGGTTGTTGTAGATTTAGAAGGAAATAAAGTTGAAGGTGAATTAAATCCATCTTCAGATACGGCAACCCATTTA
GTTTTATATAATAACTTTCCTAAAATTGGTGGAATAGTTCATACACATTCTCCTTGGGCTACTAGTTGGGCGCAAGCTGG
CAAAGAAATTCCTGCATTAGGAACTACTCATGCTGATTATTTCTATGGTGCGATACCGTGCACTAGAAAAATGAATAAAG
AGGAAATTCAAGGAGAATATGAAGTTGAAACTGGCAATGTAATAGTAGAAACCTTTGCTGATAAAAAAGCTTCTTATGTA
CCAGGTATTATAGTTAATAATCATGGTCCTTTTTCTTGGGGGGAAGATGCTACTAATGCTGTTCATAATGCAGTTGTGAT
GGAAGAAGTAGCAAAAATGGCTTATCGAACTGTAAAGTTAACTCCAGAGATTGGAGCTATTGATCAGGTTTTACTAGATA
AACATTTCTTAAGGAAACATGGAGAGGATGCTTATTATGGGCAAGGATAA

Protein sequence :
MLENLKEEVLQANLELPERGLVTYTWGNVSGIDKKKGLVVIKPSGVPYEEMTVEDMVVVDLEGNKVEGELNPSSDTATHL
VLYNNFPKIGGIVHTHSPWATSWAQAGKEIPALGTTHADYFYGAIPCTRKMNKEEIQGEYEVETGNVIVETFADKKASYV
PGIIVNNHGPFSWGEDATNAVHNAVVMEEVAKMAYRTVKLTPEIGAIDQVLLDKHFLRKHGEDAYYGQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 2e-54 56