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Name : Halha_0167 (Halha_0167) Accession : YP_007314274.1 Strain : Halobacteroides halobius DSM 5150 Genome accession: NC_019978 Putative virulence/resistance : Unknown Product : Retron-type reverse transcriptase Function : - COG functional category : - COG ID : - EC number : - Position : 175404 - 177248 bp Length : 1845 bp Strand : + Note : PFAM: Reverse transcriptase (RNA-dependent DNA polymerase) DNA sequence : ATGACTGCGTTAGAGAAGAAGCAAGTTGAGAGCAAAAAGAAAAGTAAGTTAAGAAACAACGAATATTATGATACCCAAGA AATTCAGGATATGTTATATGAATATAGTGAGAAGGGTTATAATTTTAAAAGTTTAATGCAACACATTACTTCAAGAAAAA ATATACTTTTAGCTTACAGAAATATTAAGAAAAATACTGGTAGTAAAACTAGAGGTACTAATAATAAAACCATCAAGGAT TTAGAAGAGAAATCTACAGAGGAACTTGTAGAATATGTGAGAAACAGACTTGAGTATTATGTACCACAGTCTGTAAGAAG GGTTTATATTCCTAAACCTGATGGTAGGAAAAGACCTTTAGGCATACCCACAATTAAAGATAGACTTATTCAACAATGTA TTAAACAGGTTTTAGAACCTATCTGTGAAGCTAAATTTCATAACCACAGTTATGGTTTTAGACCTAATAGGTCAACTAAA CACGCTATAGCAAGAATAATGTATTTGATAAATTTTAGCAAATTACACTATACAGTTGATATAGATATCAAAAGTTTCTT TGATAATGTTGACCATAACAAGTTGAAGAAACAATTGTGGAGTATGGGAATAAGAGATAAAAAGCTAATCTCTATACTGG GAAATATGCTAGAAGCAAAAATAGAAGGTGAGGGTGTTCCAGAGAAAGGAACACCGCAAGGTGGAATAATCTCACCTTTG CTTTCTAATATAGTATTAAATGAAATGGATTGGTGGATTTCCAATCAATGGGAAACATTTAAAACAGATTATAAATATAA TAGAAAAGGCGACAAAATTACAGCCATAAAGAAAACAAATCTAAAAGAAATCTATATTATAAGATATGCAGATGATTTTA AAATAATGTGTAGAGATTTTGAAACTGCAAGTAAAATTAAGATAGCTACAATTAAATGGTTAAAAGAAAGATTAAATCTT GAAGTGAGTGAGAAGAAGACGAGTATAACTAATCTTAAGAAAAATCATACTGAATTTTTGGGGATTAAATTGAAGGTTGT CAAGAAAGGCAATAAATACATTTGCAGGTCAAAAGTAGCCAATGGAGTAAAACCAAAATTAATTAATAAATTTAGAAATC AAATACAGCGAATTAGAAGAAAAACTACACCAAAGGAAGTATCTAAGTTAAATTCAATGATATTAGGAATGCAAAATTAC TACTCTATGGCTACATACGTAAATAAAGATTTCAGTGATATAGCCTTCAAAGTTAACAGAACCTTAAGAAAACGCCTTAG TGAAATATTGAGTGAAAAAGGTACTGAATCAAAAACTTTCCAGAAATTTTATGGAGAGTATAACTATAAGCCTCATTGTG TAGCTGGAATTAGAATATTTCCAATTGCTGGTGTAACATTTAAAGCTCCAATGAATTTTTCGCAAGAAATATGTGATTAC ACCAGAATTGGAAGGGAGAAAATACACAAGAAACTTAGAAGTGTATCACCAGTAGTTTTAAAATATTTAGTTGAAAATCC AGTTAGGGATAAATCAATTAAATATAACGATAACCGAATTGCCAGATATTCTGGACAAAATGGTTGTTGTTTTGTTACTG GTATTCCTTTAGGGATTGGAGATATTGAATGTCATCACAAAAGACCTGAAAAAGATGGAGGTAAGGACACTTACAGAAAT CTTTGCTTGGTTACTAAGGATATTCATAAATTGATACACGCTACAAAGAAAAAGACAATAAAACGCTACTATGATAAGGT GAAATGTTACTTTGATGAAAATACCTTAAGTAAGCTCAACAAACTTCGAACTAAGGCAGGAAATGACTGTATTGAACTAT CTTAA Protein sequence : MTALEKKQVESKKKSKLRNNEYYDTQEIQDMLYEYSEKGYNFKSLMQHITSRKNILLAYRNIKKNTGSKTRGTNNKTIKD LEEKSTEELVEYVRNRLEYYVPQSVRRVYIPKPDGRKRPLGIPTIKDRLIQQCIKQVLEPICEAKFHNHSYGFRPNRSTK HAIARIMYLINFSKLHYTVDIDIKSFFDNVDHNKLKKQLWSMGIRDKKLISILGNMLEAKIEGEGVPEKGTPQGGIISPL LSNIVLNEMDWWISNQWETFKTDYKYNRKGDKITAIKKTNLKEIYIIRYADDFKIMCRDFETASKIKIATIKWLKERLNL EVSEKKTSITNLKKNHTEFLGIKLKVVKKGNKYICRSKVANGVKPKLINKFRNQIQRIRRKTTPKEVSKLNSMILGMQNY YSMATYVNKDFSDIAFKVNRTLRKRLSEILSEKGTESKTFQKFYGEYNYKPHCVAGIRIFPIAGVTFKAPMNFSQEICDY TRIGREKIHKKLRSVSPVVLKYLVENPVRDKSIKYNDNRIARYSGQNGCCFVTGIPLGIGDIECHHKRPEKDGGKDTYRN LCLVTKDIHKLIHATKKKTIKRYYDKVKCYFDENTLSKLNKLRTKAGNDCIELS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2326 | NP_815981.1 | group II intron reverse transcriptase maturase | Not tested | Not named | Protein | 2e-117 | 46 |
