Gene Information

Name : Halha_1642 (Halha_1642)
Accession : YP_007315673.1
Strain : Halobacteroides halobius DSM 5150
Genome accession: NC_019978
Putative virulence/resistance : Unknown
Product : pyridoxal 5''-phosphate synthase, synthase subunit Pdx1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1655595 - 1656473 bp
Length : 879 bp
Strand : +
Note : PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1

DNA sequence :
ATGAGTAACAGATATGGATTAAATAAGAATTTGGCCCAAATGTTAAAAGGTGGAGTAATTATGGATGTAACTACTCCCGA
AGAAGCAAAAATTGCTGAAGAAGCGGGAGCAGTAGCAGTTATGGCTTTAGAGAGAGTTCCAGCTGATATCCGTAAAGAAG
GTGGAGTAGCTAGGACATCAGATCCAGCTATGATCAAACAAATTATTGATTCAGTTTCTATTCCGGTAATGGCTAAAGCT
AGAATTGGACACTTTGTAGAGGCACAAATCTTAGAAGAAATTGGAGTTGATTACATAGATGAAAGTGAAGTATTGACTCC
AGCTGATGAAGATAATCATATTGACAAAACAAAATTTGATGTACCTTTTGTCTGTGGAGCTACAAGCCTAAATGAAGCTT
TACGCAGAATTGGTGAAGGAGCAAGTATGATGCGTACAAAGGGTGAGGCAGGAACTGGTAATGTAGTAGAAGCAGTTAGA
CATATGAGAAAAGTAAATTCTCAAATTAGACAATTAACTACTATGGATAGCGAAGAATTAATGGCTGCAGCTAAAGAAAT
GAGGGCACCATTTGATTTAGTAAAGTATGTAGCAGAACATGGTGAATTACCAGTTATCAATTTTGCTGCTGGTGGAGTTG
CTACCCCAGCTGATGCTGCAATGATGATGCAACTTGGTTGTGATGGTGTATTTGTTGGCTCTGGAATCTTCAAATCTGGA
GATCCTGCTAAGCGAGCTGACGCAATTGTTAAAGCTACTGCTCATTATGATGATCCAGCTATCATAGCAGAAGTATCTGA
AAATATTGGTGAAGCAATGGTTGGTATTAATATCGATACCTTAGATGAAGATGAAAAATTAGCTCACAGAGGATGGTAA

Protein sequence :
MSNRYGLNKNLAQMLKGGVIMDVTTPEEAKIAEEAGAVAVMALERVPADIRKEGGVARTSDPAMIKQIIDSVSIPVMAKA
RIGHFVEAQILEEIGVDYIDESEVLTPADEDNHIDKTKFDVPFVCGATSLNEALRRIGEGASMMRTKGEAGTGNVVEAVR
HMRKVNSQIRQLTTMDSEELMAAAKEMRAPFDLVKYVAEHGELPVINFAAGGVATPADAAMMMQLGCDGVFVGSGIFKSG
DPAKRADAIVKATAHYDDPAIIAEVSENIGEAMVGINIDTLDEDEKLAHRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-88 70
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-88 70
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-88 70