Gene Information

Name : Halha_1639 (Halha_1639)
Accession : YP_007315670.1
Strain : Halobacteroides halobius DSM 5150
Genome accession: NC_019978
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1652541 - 1653236 bp
Length : 696 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGGAAGATAAAGAAATTTTAATTGTTGATGATGATCAGAATGTTCATGAGATTCTTAGTTTATATTTCAAAAAAGAAGG
TTGCAGTGTGCTGGTAGCTAATGATGGAGCAGAGGCTCTAGAAAAAGCCGATAACAATGAACCAGATCTTATTATTTTAG
ATATAATGATGCCTAAATTAGATGGTTTAGAAGTGATTAAGAATATTAGGCAAAATAATGATGTTCCGGTTATTTTCTTA
TCAGCTAAAAGTGAAGAATTTGATCGTATATTAGGTTTAGAATTAGGGGCAGATGATTATGTAACTAAGCCATTTAGTCC
CCGAGAGATAATAGCAAGGGCCAAGGCTATTTTTAAAAGAATAAAGCAAAGTAAACAGAATAATGAGCCTCAAAGAGATT
TAGTTATCTATTCTAATTTAGCGATTGATCCTATTAATAGAGAAGTAAAAGTAAAGGGGGAAGAAATTGAATTATCTCCT
AAAGAATATGAGTTATTGTTATTATTAGCTCAGCATCCTAATCAGGTTTTTAAGCGAGAAAGATTATATGATAGAATTTG
GGGGATGGATCATTATGGAGATATGAGAACAGTTGATGTACATATTAATTGGTTAAGAGATAAATTAGATCTTGATTATA
TCCAAACTGTCTGGGGTGTAGGATATAAATTTGTTGGTGCTAAAGATGATAAATAA

Protein sequence :
MEDKEILIVDDDQNVHEILSLYFKKEGCSVLVANDGAEALEKADNNEPDLIILDIMMPKLDGLEVIKNIRQNNDVPVIFL
SAKSEEFDRILGLELGADDYVTKPFSPREIIARAKAIFKRIKQSKQNNEPQRDLVIYSNLAIDPINREVKVKGEEIELSP
KEYELLLLLAQHPNQVFKRERLYDRIWGMDHYGDMRTVDVHINWLRDKLDLDYIQTVWGVGYKFVGAKDDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-32 44
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-31 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 3e-36 48
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 3e-36 48
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 3e-36 48
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 3e-36 48
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 2e-36 48
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 3e-36 48
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 3e-36 48
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 3e-36 48
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 2e-36 48
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 3e-36 48
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 7e-39 47
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 3e-43 46
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 3e-35 46
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 1e-34 45
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 6e-33 44
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain FJ349556.1.orf0.gene Protein 2e-40 42
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene3215. Protein 2e-25 42
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene5135. Protein 6e-20 41
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_014475.1.orf0.gen Protein 3e-32 41
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_005054.2598277.p0 Protein 3e-32 41
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene1528. Protein 4e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 2e-32 44
Halha_1639 YP_007315670.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 4e-32 44