Gene Information

Name : Halha_1360 (Halha_1360)
Accession : YP_007315398.1
Strain : Halobacteroides halobius DSM 5150
Genome accession: NC_019978
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1365304 - 1365984 bp
Length : 681 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGCTACAGGTGAAAAATTTAAGTAAAAAATACCATGATGGAGAAGAAATAGCAGTAGAAGCATTAAAGGATATTTCATT
TAATGTCCAAGAAGGGGAAATGGTAGCAATTATGGGGCCCTCTGGTTCTGGTAAATCAACTTTAATGCACTTAATTGGTT
GTTTAGACCACCCAACTTCAGGTAAATATATATTAGATGGTAAAGAAGTTACTACAGCTAATGATAAAGAATTAGCTGTA
ATTAGAAATAAAAGAATTGGTTTTGTTTTTCAACAGTTTAATTTACTTTCTAAAACTTCTGTTTTGCATAATGTAGAAGT
ACCATTAATTTATGCAGGAGTAAGTCGAAAAAAAAGACGGGATAGGGCTAGAAAATTATTACAAAAGGTTGGGCTAGGGC
ACAGATTAGATCATCAACCTAATGAAATATCTGGTGGTCAAAAACAACGTGTAGCCATTGCTAGAGCATTAGCTAATAAT
CCTTCTTTAATTTTAGCAGATGAACCAACAGGAAATCTTGATTCAAAAACAGAAGATCAAATTATAGATATTCTTCATCA
GTTACATGACCAAGGCCATACTATTGTATTAGTTACTCACTCAAAAAAAGTAGGACATAATGCAGAAAGAATCTTACATT
TACTTGATGGAGAATTAATTGAAGATGAGGTGGTAGTGTGA

Protein sequence : 
MLQVKNLSKKYHDGEEIAVEALKDISFNVQEGEMVAIMGPSGSGKSTLMHLIGCLDHPTSGKYILDGKEVTTANDKELAV
IRNKRIGFVFQQFNLLSKTSVLHNVEVPLIYAGVSRKKRRDRARKLLQKVGLGHRLDHQPNEISGGQKQRVAIARALANN
PSLILADEPTGNLDSKTEDQIIDILHQLHDQGHTIVLVTHSKKVGHNAERILHLLDGELIEDEVVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-34 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halha_1360 YP_007315398.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 7e-54 59
Halha_1360 YP_007315398.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 2e-40 48
Halha_1360 YP_007315398.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 3e-43 47
Halha_1360 YP_007315398.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 3e-38 43