Gene Information

Name : Halha_1256 (Halha_1256)
Accession : YP_007315295.1
Strain : Halobacteroides halobius DSM 5150
Genome accession: NC_019978
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1268435 - 1269361 bp
Length : 927 bp
Strand : +
Note : PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase

DNA sequence :
ATGAAAGAGTTAGTTATCGGAACGCGCAAGAGTGATTTAGCTGTAGCTCAAACAAAGCTTGTAGCTAATAGGTTACAAGC
TGAATTTCCAGACTATAAAATTATTTTAAATAAGATAAGTACTAAAGGAGATCGGATTTTAGATAGATCGCTGGTTGATA
TAGGTGGTAAGGGATTATTTATTAAAGAAATAGAGGTTGCTTTACTACAAGAAGAGATTGATTTAGCTGTTCATAGTCTA
AAGGATGTTCCAGGAGCAGTAACAGATCAATTTGAAATCGTAGCTAGTCCTAAACGGGCCAACCCCTATGATGTATTGAT
CTCTAATGAAGGGCAGTTGTTAGACCAACTAGCGCAAGGAGCTAGGATTGGAACAGGTAGTGCAAGAAGAAAGAGTCAAC
TATTAAATTACCGACCTGATTTAGAGGTTGTAGCAATCAGAGGTAATATTAATACGAGATTAGATAAATTAGCTAACCAA
GATTTAGATGCTATTGTATTAGCAGCAGCTGGATTAGAAAGGATGGGTTGGGAGGATAAAATCACCCAGTATTTAGATTT
TCCTCCCTTCATACCTGCAGTTGGTCAAGGGGCTTTGGCCCTAGAGGTAAGAAAGGATGACCAGCAGATAAAGAGGATAT
TAAGTGCAATTAATCACCAACCAACTTATGATGTTATCACAGCTGAGCGTGGTTTTTTAGCCTGTTTAGATGGAGATTGT
AAAGCGCCATTAGGGGCCTTGGCCCAAATTAGAGGTGATAAATTAACTATTGCAGGAATGGTAGCTAAGTTAGATGGTAG
TAGATTAATTAAAGATCAAGTGACAGGTTTACGAAAAGATGTAGCTAAGTTAGGGGCTAAATTAGGAGAGAAATTACTTA
ACCAAGGAGCAAAAGAAATATTGGCTGAAATTAAGGAGGAGAATTAA

Protein sequence :
MKELVIGTRKSDLAVAQTKLVANRLQAEFPDYKIILNKISTKGDRILDRSLVDIGGKGLFIKEIEVALLQEEIDLAVHSL
KDVPGAVTDQFEIVASPKRANPYDVLISNEGQLLDQLAQGARIGTGSARRKSQLLNYRPDLEVVAIRGNINTRLDKLANQ
DLDAIVLAAAGLERMGWEDKITQYLDFPPFIPAVGQGALALEVRKDDQQIKRILSAINHQPTYDVITAERGFLACLDGDC
KAPLGALAQIRGDKLTIAGMVAKLDGSRLIKDQVTGLRKDVAKLGAKLGEKLLNQGAKEILAEIKEEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-53 44
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-53 44