Gene Information

Name : Metho_0375 (Metho_0375)
Accession : YP_007312177.1
Strain : Methanomethylovorans hollandica DSM 15978
Genome accession: NC_019977
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 374228 - 374986 bp
Length : 759 bp
Strand : -
Note : -

DNA sequence :
ATGTATCGCGGTGATGGGCATTATAGCATATTCCTGGAAGAAGCGCAAAAACTCAGAATGAACGGGGCATACATGCAAGG
TCCTATCGTCCAGCTTACTGATGTGAAGAAAATATACCAGCTTGGAACAAGCAGAATATATGCTCTGAACGGTGTCAGTC
TTTCAATTGAACGAGGTGACTTTGTGACCATTATGGGATCTTCAGGGTCTGGGAAATCCACAATGCTTAACCTCATAGGT
TGCCTTGACCAGCCCACTGAAGGTACAGTGAAGATCAATGGTACGGACCTGTCTCTTCTTAACGATGAACAGCTTACAGA
GATCAGAAGAAATAATATCGGTTTCATTTTTCAGCAATTCAACCTCATCCCTACTCTCACTGCATTGGAGAATGTTGAAA
TGCCTATGATCTTCACAGGTATCCCGGAACAAGAGCGCCGTAAAAGGGGTATGGAGTTTTTAAGAAGGGCGAACCTTGGT
CCGGAATTTGCAGAGCACAAACCCAGTGAACTTTCAGGAGGGCAGCAACAAAGAGTTGCCATCGCCAGGGCACTGGCCAA
TTCCCCACCTATCCTTTTAGCAGATGAGCCTACAGGAAATCTCGATACAAAGACCGGAAAAAGTGTAATGGAACTTCTCA
GTAACCTCAATTCTCATGGGACTACCATTATAGTTGTGACACATGACATCAAGATAGCAGAATATGCTAATACAAACATA
GTTCTGAGGGATGGTGAAATCTTTGGGACTTCAGAGTAG

Protein sequence :
MYRGDGHYSIFLEEAQKLRMNGAYMQGPIVQLTDVKKIYQLGTSRIYALNGVSLSIERGDFVTIMGSSGSGKSTMLNLIG
CLDQPTEGTVKINGTDLSLLNDEQLTEIRRNNIGFIFQQFNLIPTLTALENVEMPMIFTGIPEQERRKRGMEFLRRANLG
PEFAEHKPSELSGGQQQRVAIARALANSPPILLADEPTGNLDTKTGKSVMELLSNLNSHGTTIIVVTHDIKIAEYANTNI
VLRDGEIFGTSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-35 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Metho_0375 YP_007312177.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 8e-52 51
Metho_0375 YP_007312177.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 1e-44 49
Metho_0375 YP_007312177.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 2e-35 48
Metho_0375 YP_007312177.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 5e-39 45
Metho_0375 YP_007312177.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 8e-34 42