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Name : Metho_1322 (Metho_1322) Accession : YP_007313073.1 Strain : Methanomethylovorans hollandica DSM 15978 Genome accession: NC_019977 Putative virulence/resistance : Unknown Product : type I site-specific deoxyribonuclease, HsdR family Function : - COG functional category : - COG ID : - EC number : - Position : 1314613 - 1317858 bp Length : 3246 bp Strand : + Note : TIGRFAM: type I site-specific deoxyribonuclease, HsdR family DNA sequence : ATGTCCATGAATAAGATCACAGAGTCCGGAATAGAAAAATTCGCCATCGAACTCCTGGAACATCAGGGATACCGGTACGT CTATGCTCCTGACATCGCCCCGGACAGCGACACTCCCGAACGGGACAGGTTCGAAGATGTGCTGTTGTTGGAGCGCCTGC GCACAGCCGTCGGCCGGATTAATCCCAACGTACCGGCAGATGCAAGGGAAGACGCCATCCGGCAGGTCCGGCGCCTGAAT TCGCCAGAACTCATATCCAACAACGAGACGTTTCACAGGATGCTCACAGAGGGCATAAATGTAAGCTACCAAAAAGACGG AAATGACAGAGGCGACCTGGTCTGGCTCATTGATTTTAACGATACTGAAAATAACGAATTCCTTGTTGCCAATCAATTCA CTGTCATTGAGAACGATGTGAACAAACGTCCGGATATCATTCTTTTTGTCAATGGTCTGCCACTTGTGGTTATCGAGCTC AAGAATCCCGCAGATGAGAACGCAACCGTAAGATCTGCATTCAGGCAGCTGCAGACCTATAAACAAACCATCCCATCTTT ATTTGCATACAACGGTTTCATGGTCATCTCCGACGGGCTGGAAGCCAGGTCAGGTTCCCTCTCCGCCGGATTCACCCGGT TCATGACATGGAAAAGCTCGGACGGCAGAGTCGAAGCCTCACCGCTCATCGGACAGCTTGAAACACTAATTAAAGGGATG CTTGAAAAAACCACACTCCTGGATATTCTCCGGCATTTCATCGTTTTTGAAAAATCAAAAAAAGAAGACTCTACGACCGG TATCATCACCATCCGGACCGTGAAGAAGCTCGCTTCATATCATCAGTACTATGCAGTTAACCGGGCGGTGGAATCAACGC TCCGGGCATCGGGTTATGTTGCAAAGGAGAAGTGGGACTGGAATACTTTAGGTATACAGCATGAAAGTCCCGAAAGCTAT GGTCTTCCCGGAGTGAAAAAACAGCCCGTAGGGGACCGCAAAGGCGGCGTCATCTGGCACACCCAGGGAAGCGGCAAATC CCTTTCCATGGTATTCTACGCAGGGAAGATCGTACTCGCAATGGATAACCCCACCATCGTGGTGATCACCGACAGGAACG ATCTTGACGATCAGCTTTTTGACACCTTCGCCGCTTCAAAGCAACTCCTCAGACAAGAGCCTGTACAGGCAGAGAACAGG AACCATTTAAAAGAACTCCTGAACGTCGTATCAGGCGGCATCGTATTTACCACCATCCAGAAGTTCCAGCCCGAAGAAGG CAACGTCTACCCGCAACTCTCAGACCGGGAAAACATCATTGTGATAGCTGACGAAGCACACCGGACACAATACGGCTTCA GGGCAAAACATGTTGACGTTAAAGATGAGCAGGGAAACGTGATCGGCAAAAAGATCGTTTACGGTTTCGCTAAATACACA CGTGATGCCCTTCCCAATGCCACTTTCCTTGGTTTTACCGGTACGCCCATAGAGAAAACAGACGTGAACACGCCTGCTGT TTTTGGTAATTATGTTGACATCTATGATATCTCGCAATCTATTGAGGACGGCGCCACGGTAAAGATATATTATGAGAGCA GGCTGGCAAAAGTCGCTCTGAGCAGTGAAGGAAAAAAGCTTGTCGCGGAACTGGATGAAGAGCTGGATAAAGAAGACCTT GCAGAGACCCAGAAGATCAAAGCGAAGTGGACCCAGCTGGAAGCCTTGATAGGCAGTGAAGCCCGGATAAAACAGATAGC CCAGGATATTGTAACCCACTTCGGACAACGACAGGAAGTGTTCGAAGGCAAAGGTATGATCGTTACAATGTCACGAAGGA TAGCTGCCGACCTGTATGAGGAGATGATCAGAGTAAAACCGCAATGGCACAGCGACGATCTCCGCAAAGGTGCCATCAAG GTGGTTATGACCTCCGCATCCTCCGACGGTCCCAGAATATCGAAACATCATACAACTAAAGATCAAAGAAGGGTTTTGGC AGAACGAATGAAAGACCCGGAGGACGAACTGCAACTGGTGATAGTCCGGGATATGTGGCTAACGGGTTTCGATGTTCCGT GTCTCCACACAATGTACATCGACAAGCCAATGAAAGGTCATACCCTCATGCAGGCCATCGCACGGGTAAACCGCGTCTAT AAAGACAAGCCCGGCAGCCTGATAGTTGATTATCTGGGAATAGCCTCCGACCTCAAGGAAGCCTTATCCTTCTACTCTGA TAGCGGAGGGAAGGGCGATCCTGCTGTCCTTCAGGAAAAAGCAGTTCAGTTAATGCTTGAGAAACTGGAGATCGTATCCC AGATGTTCCATGGATTTGCCTTTGAGGATTACTTTGAAGCGGATACATCCAGAAAGCTGTCAATCATACTTGAAGCGGAA GAACATATCCTGGGTCTGGAAAATGGCAAAAAAAGGTATATTGATGAAGTAACTGCTTTATCAAAGACATTTTCCCTTGC TATCCCGCATGAACAGGCAATGGATGTAAAGGATGAGATATCGTTCTATCAGGCAGTAAAAGCCAGGCTTGTAAAATTTG ACAGTACCGGCATCGGAAAAACAGACGAGGAAATTGAAACTGCGATCAGACAGGTTATTGATAAGGCCCTTGTTACCGAA CGGGTGATAGATGTATTTGATGCGGCCGGGATTAAAAAACCGGATATTTCCATATTGTCAGAAGATTTCCTTGCAGAAGT CCGGAATATGGAACACAAAAACCTAGCCATGGAAGTCCTGAAAAAGTTGCTCAATGATGAAATAAGAGCCCGCACAAAGA AGAACCTTGTTCAGAGCAGGTCATTAATGGAAATGCTGGAAAATTCCATCGTCAGATATCATAACAAGGTCTTAACTGCA GCTGAGGTTATCGAGGAATTAATCAAACTCAGTAAAGAGATCAAACGGATGGACAAAGAGCCTCAGGAAATGGGTTTGTC TGAATTCGAATATGCCTTTTACACGGCAATTGCGGATAATGAAAGTGCCAGAGAAGTAATGCAAAAAGAGCAATTGAGAG AATTAGCTGTTGTTTTATTTGAAAAGGTAAAACAAAACGCATCCATCGACTGGACAATTAAAGAAAGCGTCAGGGCTAAA TTAAAAGTAATTGTAAAAAGGACCCTGCGACAATATGGTTATCCACCTGATATGCAGGCACTGGCTACGGAAACCGTGCT CAGGCAGGCGGAATTGATCGCAGATGAAATAACAAAGGATGTTTAA Protein sequence : MSMNKITESGIEKFAIELLEHQGYRYVYAPDIAPDSDTPERDRFEDVLLLERLRTAVGRINPNVPADAREDAIRQVRRLN SPELISNNETFHRMLTEGINVSYQKDGNDRGDLVWLIDFNDTENNEFLVANQFTVIENDVNKRPDIILFVNGLPLVVIEL KNPADENATVRSAFRQLQTYKQTIPSLFAYNGFMVISDGLEARSGSLSAGFTRFMTWKSSDGRVEASPLIGQLETLIKGM LEKTTLLDILRHFIVFEKSKKEDSTTGIITIRTVKKLASYHQYYAVNRAVESTLRASGYVAKEKWDWNTLGIQHESPESY GLPGVKKQPVGDRKGGVIWHTQGSGKSLSMVFYAGKIVLAMDNPTIVVITDRNDLDDQLFDTFAASKQLLRQEPVQAENR NHLKELLNVVSGGIVFTTIQKFQPEEGNVYPQLSDRENIIVIADEAHRTQYGFRAKHVDVKDEQGNVIGKKIVYGFAKYT RDALPNATFLGFTGTPIEKTDVNTPAVFGNYVDIYDISQSIEDGATVKIYYESRLAKVALSSEGKKLVAELDEELDKEDL AETQKIKAKWTQLEALIGSEARIKQIAQDIVTHFGQRQEVFEGKGMIVTMSRRIAADLYEEMIRVKPQWHSDDLRKGAIK VVMTSASSDGPRISKHHTTKDQRRVLAERMKDPEDELQLVIVRDMWLTGFDVPCLHTMYIDKPMKGHTLMQAIARVNRVY KDKPGSLIVDYLGIASDLKEALSFYSDSGGKGDPAVLQEKAVQLMLEKLEIVSQMFHGFAFEDYFEADTSRKLSIILEAE EHILGLENGKKRYIDEVTALSKTFSLAIPHEQAMDVKDEISFYQAVKARLVKFDSTGIGKTDEEIETAIRQVIDKALVTE RVIDVFDAAGIKKPDISILSEDFLAEVRNMEHKNLAMEVLKKLLNDEIRARTKKNLVQSRSLMEMLENSIVRYHNKVLTA AEVIEELIKLSKEIKRMDKEPQEMGLSEFEYAFYTAIADNESAREVMQKEQLRELAVVLFEKVKQNASIDWTIKESVRAK LKVIVKRTLRQYGYPPDMQALATETVLRQAELIADEITKDV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 48 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 48 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 47 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 45 |
