Gene Information

Name : Metho_1252 (Metho_1252)
Accession : YP_007313011.1
Strain : Methanomethylovorans hollandica DSM 15978
Genome accession: NC_019977
Putative virulence/resistance : Resistance
Product : copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1236259 - 1238388 bp
Length : 2130 bp
Strand : -
Note : TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

DNA sequence :
ATGGGGAATGATGAGATGTCAATCCATGAGCACATGCAGCATGATATGGGGCAGCAGACAATGGAACACCACCCATCTCA
TGTGGAACAAGGGGACATGAAGCGTGGTGAACATAGTCCACTGGCTAAACACGCCGAACATACTAACCATCACGCAATGA
TGGTGGAAGATTTCAAGAAACGCTTTTTTGTCTCTATTATCATCACTATCCCTGTGCTTTTACTGTCTCCCATCATCCGT
GAGTTCCTTTTTACATTAGGGATAACAGTTCCCGGTTTCTCCGGAGACATTTATGTACTATTCTTGTTGTCTACGGTCCT
ATTTTTCTACGGAGGCTGGCCCTTCCTTAAGGGAATCAGGGATGAACTGACTTCACATGCTCCTGGTATGATGACCCTGA
TAGCTATAGCTATCACAGTTGCATATGTCTACAGCAGTCTGGTCGTGTTTGGCCTAATGGGAATGATCTTCTTTTGGGAA
CTGGCAACGCTTATAGATATCATGCTTCTGGGACACTGGCTGGAGATGCGCTCTATAATGGGAACATCAAAGGCACTTGA
AGAACTGGCAAGGCTGCTACCTTCTGATGCCCACCGGGTCGATACAAATGGAAATGTTAATGATGTTCCTTTGGAAGAGA
TCATTGCCGGTGACCTGCTGCTTGTAAAGCCAGGTGAGAAGATCCCGGCGGATGGTGTGGTCGTTGAAGGAAATACCTCT
GTCAATGAAGCTATGCTTACAGGTGAATCGAAACCCGTTACCAAAATTAAAGATAAGGAGGTCATCGGAGGTTCCATCAA
TGGCGAGGGAGCTATAAAGATCAAAGTGAAGAAAACAGGAGCCGGATCTTTCCTTTCCCAGGTAGTAGCACTTGTCAGGG
AAGCCCAGGAAAGCAAATCTCATACCCAGGATCTTGCTGACAGGGCTGCCAAGTGGCTTACTATAATTTCCCTCAGTGTA
GGTACTCTCACATTGTTGGTGTGGACTCTGCTTATCCAGGCCAATTTTGCATTTTCCCTGGAAAGAGCTGTTACAGTAAT
GGTAATAACTTGTCCTCATGCTCTGGGTCTTGCAATTCCTCTGGTAGTTGCCATATCCTCTGCGCTGGCAGCACGCAATG
GCCTACTTATCAGGAACAGAGTAGCCTTTGAGAACGCTCGCAACCTGAATGCCATTATATTCGACAAGACCGGTACGCTG
ACACAGGGCAAGTTCGGAATAACTGAAACTGTTATTTTCGATGCCACAATGGATGAAAAAGAACTGCTCAAGTATGCCAC
TTCTGTGGAAGCTAATTCAGAACATCACATTGCCAGGGGAATAGCGGCATCAATGGAGGATATGTATAATGTAGAGGATT
TCCTATCCATTCCTGGGAAAGGAGCCCAGGGAATGGTAGAAGGAAAGGAAGTAAAGGTAGTTAGCCCTGGATATCTGAGA
GAACAGGGCATTAACGTTGAAAATGAAGTTGTGGACAAACTCAGATCCCAAGGCAAAACAGTTGTTTACGTCATGATGGA
TGGAATAGTGAAGGGTGCCATTGCCTTGGCTGATATCATCAGACCAGAATCTAAACTGGCAATTTCCACACTAAAAGAAA
TTGGAATCAAATGCATGATGCTTACCGGTGATAATGAACAAGTTGCAAGATGGGTTGCAGAAGAGATAGGACTGGACGAG
TATTTTGCCGAGGTGCTGCCACAGGAAAAGGCTGCCAAAGTGAAAGAGGTACAGTCAAGAGGTCTTGTGGTTGCTATGAC
CGGAGATGGAGTGAACGATGCTCCTGCTCTTGCCCAAGCGGACATAGGGATCGCCATAGGAGCAGGGACCGACGTAGCTG
TGGAAACAGCAGATATAATACTGGTCAAAAGCAATCCCAAAGATGTTGTTTCTATAGTCGTTCTCTCCCGAGCTACCTAC
AGAAAGATGCTTCAGAACCTCTTCTGGGCCACGGGATATAACGTGGTGGCAATACCACTAGCTGCCGGTGTACTGTACAA
TCAAGGGATATTACTATCTCCTGCGGTTGGAGCTGTCCTTATGTCCCTTAGCACTATAATTGTAGCTATAAATGCCAGGT
TTTTGTCAATGACAGGATTACAAAATCCTGAACTTGATTTACACCCTTAA

Protein sequence :
MGNDEMSIHEHMQHDMGQQTMEHHPSHVEQGDMKRGEHSPLAKHAEHTNHHAMMVEDFKKRFFVSIIITIPVLLLSPIIR
EFLFTLGITVPGFSGDIYVLFLLSTVLFFYGGWPFLKGIRDELTSHAPGMMTLIAIAITVAYVYSSLVVFGLMGMIFFWE
LATLIDIMLLGHWLEMRSIMGTSKALEELARLLPSDAHRVDTNGNVNDVPLEEIIAGDLLLVKPGEKIPADGVVVEGNTS
VNEAMLTGESKPVTKIKDKEVIGGSINGEGAIKIKVKKTGAGSFLSQVVALVREAQESKSHTQDLADRAAKWLTIISLSV
GTLTLLVWTLLIQANFAFSLERAVTVMVITCPHALGLAIPLVVAISSALAARNGLLIRNRVAFENARNLNAIIFDKTGTL
TQGKFGITETVIFDATMDEKELLKYATSVEANSEHHIARGIAASMEDMYNVEDFLSIPGKGAQGMVEGKEVKVVSPGYLR
EQGINVENEVVDKLRSQGKTVVYVMMDGIVKGAIALADIIRPESKLAISTLKEIGIKCMMLTGDNEQVARWVAEEIGLDE
YFAEVLPQEKAAKVKEVQSRGLVVAMTGDGVNDAPALAQADIGIAIGAGTDVAVETADIILVKSNPKDVVSIVVLSRATY
RKMLQNLFWATGYNVVAIPLAAGVLYNQGILLSPAVGAVLMSLSTIIVAINARFLSMTGLQNPELDLHP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 3e-90 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Metho_1252 YP_007313011.1 copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting BAC0629 Protein 0.0 65
Metho_1252 YP_007313011.1 copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting BAC0079 Protein 1e-134 46