Gene Information

Name : Metho_1033 (Metho_1033)
Accession : YP_007312801.1
Strain : Methanomethylovorans hollandica DSM 15978
Genome accession: NC_019977
Putative virulence/resistance : Unknown
Product : pyridoxal 5''-phosphate synthase, synthase subunit Pdx1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1028309 - 1029205 bp
Length : 897 bp
Strand : +
Note : TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1

DNA sequence :
ATGGAACTTGAGAAACTGAGACATGGTACTGAACTGATCAAGCGTGGTTTTGCCAGCATGCAGAAAGGAGGTGTCATTAT
GGATGTGACAAATCCCGAACAGGCAAAGATAGCAGAGGATGCCGGAGCAGTTGCGGTGATGGCTCTGCAGGCCGTGCCGG
CCGACATCAGGAAAGCCGGGGGTGTTGCAAGGATGGCAGATCCTCAGATAATAACGGAGATCATCGAATGTGTAACCATC
CCTGTCATGGCAAAAGCACGTATCGGACACTTTGTAGAAGCTGAGATTCTGCAGGCTCTGGGAGTTGATATGGTGGACGA
GTCTGAGGTGCTTACACCAGCAGATGAAAAATTCCATATAGATAAGACCCAGTTCACCGTTCCTTTCGTGTGCGGAGCCC
GTAACCTTGGAGAAGCATTGCGCAGGATCAATGAAGGTGCTGCAATGATACGCACCAAAGGCGAAGCCGGCACGGGAGAT
GTAAGGGAAGCTGTGCGTCACATGAAACAGATCACAGGAGAGGTCAGAGCCCTTGCAGGCAGGAATAAGGAAGAATTGAT
GTCCACAGCCCGCGATATCGAGGCTCCTATTGAGCTTGTTATTGAAACTGCACAGCTGCAGAGGTTACCTGTGGTGAACT
TTGCAGCAGGCGGCGTGGCAACACCGGCAGATGCAGCCCTTATGATGAGATTAGGTGCTGACGGTGTGTTCGTAGGTTCT
GGAATCTTCAAGGCAGAGAAACCTGAGCTTATGGCATCGGCCATAGTGGAAGCCGTCAATAACTATGATAAGCCTCAGGT
GCTTGCAGAGATATCAAAAGGCATTGGTGCTGGCATGAAAGGCATAAGCACGGATACAATCCCTCCTGAGCAGGCTTTAC
AGACCAGAGGATGGTAA

Protein sequence :
MELEKLRHGTELIKRGFASMQKGGVIMDVTNPEQAKIAEDAGAVAVMALQAVPADIRKAGGVARMADPQIITEIIECVTI
PVMAKARIGHFVEAEILQALGVDMVDESEVLTPADEKFHIDKTQFTVPFVCGARNLGEALRRINEGAAMIRTKGEAGTGD
VREAVRHMKQITGEVRALAGRNKEELMSTARDIEAPIELVIETAQLQRLPVVNFAAGGVATPADAALMMRLGADGVFVGS
GIFKAEKPELMASAIVEAVNNYDKPQVLAEISKGIGAGMKGISTDTIPPEQALQTRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-80 64
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-80 64
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-80 63