Gene Information

Name : Natoc_2019 (Natoc_2019)
Accession : YP_007309595.1
Strain : Natronococcus occultus SP4
Genome accession: NC_019974
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1943711 - 1943914 bp
Length : 204 bp
Strand : -
Note : IMG reference gene:2506730735; PFAM: Helix-turn-helix

DNA sequence :
ATGGAAAATCAGGTCACGGAACGTCGGAACGAACGGGGGCTGAGTCAGGGTGAACTTGCCGAAGCTGTCGGCGTAACCCG
TCAGACGATCAATTCGATCGAGCGCGAACGGTACGATCCATCACTGGAACTGGCCTTCAAGCTGGCAGCGTACTTCGACT
GTCGCGTCGACGATCTCTTCGATCCGGATCTCGACGGCGAGTAA

Protein sequence :
MENQVTERRNERGLSQGELAEAVGVTRQTINSIERERYDPSLELAFKLAAYFDCRVDDLFDPDLDGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 1e-10 51
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-09 50
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-09 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Natoc_2019 YP_007309595.1 putative transcriptional regulator VFG2175 Protein 9e-10 50
Natoc_2019 YP_007309595.1 putative transcriptional regulator VFG2168 Protein 9e-10 50