Gene Information

Name : Mesau_05056 (Mesau_05056)
Accession : YP_007306744.1
Strain : Mesorhizobium australicum WSM2073
Genome accession: NC_019973
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5111986 - 5113260 bp
Length : 1275 bp
Strand : -
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase

DNA sequence :
ATGGATCTCGCCTCAAGGAAAATAGCTGTCATCGGACTTGGCTATGTCGGTCTGCCGCTGGCTGTGGCCTTCGGGGCGAC
CAGGGATGTGATCGGCTTCGACATCAACCCGTCGCGCGTGGAGGCACTGAAGCGCGGCGAGGACCATACGTTAGAAGCCA
GCGAGGAGGAAATCGCCGCCGCCAGAGGGCTGAAGTTCACCAGCGAGAAAGCCGATCTGCACGACTGCGGAATTTTCATC
GTTACCGTGCCCACGCCGATCGACCGGGCCAACAGGCCGGACCTGAAGCCTCTCGTCATGGCGTCGACGACGGTCGGCGA
GGTCATATCCCCGGGCGCGGTGGTGATCTTTGAATCCACCGTCTATCCCGGCTGCACGCAGGAAGTCTGCGCACCGCTGA
TCGAGAAACATTCCGGGCTGCGTTACAACAGCGATTTCTTCCTCGGCTACAGTCCAGAGCGCATCAACCCCGGCGATCGC
GAGCACCGGCTGCAGACGATCGTCAAGGTCACCAGCGGTTCCACGCCAGAGGCGGCGGAGGCCATCGACGCGCTCTATGC
CTCGATCGTGCCGGCGGGTACGCATCGTGCCTCCAGCATTGCCGTGGCCGAGGCCGCCAAGGTCATCGAGAACACGCAGC
GCGACTTGAACATCGCCCTGATGAACGAGCTGTCGCTGATCTTCGGCAAGCTGGGCATCGACACGTCGGAGGTGCTGGAG
GCGGCCGGCACCAAATGGAATTTCCTGCGCTTCACGCCGGGCCTCGTCGGCGGGCACTGCATCGGCGTCGATCCTTATTA
TCTCACCCACAAGGCCCAGGAACTCGGCTATCATCCCGAGGTGATTCTTGCCGGGCGCCGCATCAATGACGGCATGGGCC
AGCATGCGGCGGACCAGACGGCCCGCCTGATGATGCGCAAGGGCATACCTGTCGTTGGCAGCCGGATTCTGGTCATGGGT
GCGGCCTTCAAGGAAAACTGTCCGGACTTGAGGAATTCCAAGGTCGTCGACGTCGTCGCGCAACTGAGGCAGTACAATGC
CGGCATCGATATCTGGGACCCTTGGGTCGACGCGCAGGAATGCGCACGCGCTTTCGGCACGGCGAGCGTGAAGGAGATGC
CCGCCGCGCGCTATGACGGCGTCATCGTCGCTGTCGGACACGCGCAGTTCCGCAGCTTGGGCGTTGCGGGGCTGAAGTCG
CTTTGCAAGGACCCCAGTGTAATCTACGACATCAAGGGGCTGTTCCCTAGGGACGTTACGGACGGGCGCTTCTGA

Protein sequence :
MDLASRKIAVIGLGYVGLPLAVAFGATRDVIGFDINPSRVEALKRGEDHTLEASEEEIAAARGLKFTSEKADLHDCGIFI
VTVPTPIDRANRPDLKPLVMASTTVGEVISPGAVVIFESTVYPGCTQEVCAPLIEKHSGLRYNSDFFLGYSPERINPGDR
EHRLQTIVKVTSGSTPEAAEAIDALYASIVPAGTHRASSIAVAEAAKVIENTQRDLNIALMNELSLIFGKLGIDTSEVLE
AAGTKWNFLRFTPGLVGGHCIGVDPYYLTHKAQELGYHPEVILAGRRINDGMGQHAADQTARLMMRKGIPVVGSRILVMG
AAFKENCPDLRNSKVVDVVAQLRQYNAGIDIWDPWVDAQECARAFGTASVKEMPAARYDGVIVAVGHAQFRSLGVAGLKS
LCKDPSVIYDIKGLFPRDVTDGRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 8e-126 59
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 8e-126 59
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-108 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesau_05056 YP_007306744.1 nucleotide sugar dehydrogenase VFG0431 Protein 4e-126 59